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The map label for this gene is 189025458

Identifier: 189025458

GI number: 189025458

Start: 230360

End: 231100

Strand: Direct

Name: 189025458

Synonym: TPASS_0225

Alternate gene names: NA

Gene position: 230360-231100 (Clockwise)

Preceding gene: 189025457

Following gene: 189025462

Centisome position: 20.22

GC content: 51.42

Gene sequence:

>741_bases
ATGCCAAAACAAGTAGTCGTTTTTGCTATGTGGTGTATCGGTTTGGGCGTACTGGTATCGCATCCTGTCTCTGCGAAGCA
GAATGCTGTCTCTCGTGCGGAGGTGAAAGAGACGCCGGCGAAGTTTTTTCAGTACGGTCTGACTCCCGACCGTGATGGGA
TAATTATCACGCGGTATCTGGGCAAGGGCATTGCAGTGGTACTGCCCAGTCAGATTGATGGGCTGCCGGTTGTCGAGGTG
GCTACCAAGGCGTTTTATGGGTGCGTTTCGCTGGTGCGGGTGTCGTTGCCTAGTTCGGTGCGCATGATTGGGCAGCATGC
ATTTGATGGGTGTACAAAACTCGCTCGTATTGAACTTCCGGACGGCTTGCGAGAGATTCGTCATCATGCATTTCACAAGT
GTGTGAGTCTGGCAGGAATTGTGTTTCCGAGATCGCTGCAGGTGATTGGGCAGGATGTGTTTTCTTCGTGTGGAAGCCTT
GTAGACGTGGTTTTACCTAATTCCGTGAAGGAAATTGGATCTGGGGCCTTTCGAGACTGCGCGGAATTAGCGTCGGTTCG
TCTTCCAGTTGGAGTGAAGAATCTTGCAGATGGTCTGTTTGAAGGTTGTCGGAATTTGGTTGAGTTGGGTAATCTTCCGG
AGAAGGTGTCATTTGGGGTTGGAGTGTTCGTCGGGTGTTATCGTTTGCCTGATGTGCTGAAGCGGAGCGTGCGTAAGCTC
GGGTACAAAGGCGAGTTCTAA

Upstream 100 bases:

>100_bases
GGGGGTTCGTCATGCTTGCGCACCGCTTGTGTGGGACGCGTATCCATTGAAGTGAGTGTTAGTTTTTGGCTCGTGTTGAT
TTAAAAAGGAGGACGAAATA

Downstream 100 bases:

>100_bases
AGAATTTTATGCGGGTGGTGGGGGTTGACAAGGGGTATAGGTTATGGGTAGAGTGGTTGAGTTGTGTGTGCTGCGGGTAT
GTGGTGCGCGCGGAATGATA

Product: leucine-rich repeat protein TpLRR

Products: NA

Alternate protein names: Cell Surface Leucine-Rich Repeat-Containing Protein; Fibronectin Type III Domain-Containing Protein; Surface Protein; Surface Antigen BspA; Leucine-Rich Repeat-Containing Protein; Type 1 Dockerin; Ig Domain-Containing Domain-Containing Protein; Ig Domain Domain Protein; Surface Antigen BspA-Like Protein; Leucine Rich Repeat Domain Protein; Xin Domain-Containing Protein; Surface Antigen BspA Like Protein; SEC-C Motif Domain Protein; Ig Domain Protein; Leucine Rich Repeat Domain-Containing Protein; Transglutaminase Domain-Containing Protein; Ig Domain-Containing Protein

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MPKQVVVFAMWCIGLGVLVSHPVSAKQNAVSRAEVKETPAKFFQYGLTPDRDGIIITRYLGKGIAVVLPSQIDGLPVVEV
ATKAFYGCVSLVRVSLPSSVRMIGQHAFDGCTKLARIELPDGLREIRHHAFHKCVSLAGIVFPRSLQVIGQDVFSSCGSL
VDVVLPNSVKEIGSGAFRDCAELASVRLPVGVKNLADGLFEGCRNLVELGNLPEKVSFGVGVFVGCYRLPDVLKRSVRKL
GYKGEF

Sequences:

>Translated_246_residues
MPKQVVVFAMWCIGLGVLVSHPVSAKQNAVSRAEVKETPAKFFQYGLTPDRDGIIITRYLGKGIAVVLPSQIDGLPVVEV
ATKAFYGCVSLVRVSLPSSVRMIGQHAFDGCTKLARIELPDGLREIRHHAFHKCVSLAGIVFPRSLQVIGQDVFSSCGSL
VDVVLPNSVKEIGSGAFRDCAELASVRLPVGVKNLADGLFEGCRNLVELGNLPEKVSFGVGVFVGCYRLPDVLKRSVRKL
GYKGEF
>Mature_245_residues
PKQVVVFAMWCIGLGVLVSHPVSAKQNAVSRAEVKETPAKFFQYGLTPDRDGIIITRYLGKGIAVVLPSQIDGLPVVEVA
TKAFYGCVSLVRVSLPSSVRMIGQHAFDGCTKLARIELPDGLREIRHHAFHKCVSLAGIVFPRSLQVIGQDVFSSCGSLV
DVVLPNSVKEIGSGAFRDCAELASVRLPVGVKNLADGLFEGCRNLVELGNLPEKVSFGVGVFVGCYRLPDVLKRSVRKLG
YKGEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26570; Mature: 26438

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCC
>Mature Secondary Structure 
PKQVVVFAMWCIGLGVLVSHPVSAKQNAVSRAEVKETPAKFFQYGLTPDRDGIIITRYL
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
GKGIAVVLPSQIDGLPVVEVATKAFYGCVSLVRVSLPSSVRMIGQHAFDGCTKLARIELP
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
DGLREIRHHAFHKCVSLAGIVFPRSLQVIGQDVFSSCGSLVDVVLPNSVKEIGSGAFRDC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHH
AELASVRLPVGVKNLADGLFEGCRNLVELGNLPEKVSFGVGVFVGCYRLPDVLKRSVRKL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYKGEF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA