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The map label for this gene is spsC [C]

Identifier: 189025312

GI number: 189025312

Start: 85872

End: 87110

Strand: Direct

Name: spsC [C]

Synonym: TPASS_0078

Alternate gene names: 189025312

Gene position: 85872-87110 (Clockwise)

Preceding gene: 189025311

Following gene: 189025313

Centisome position: 7.54

GC content: 50.04

Gene sequence:

>1239_bases
ATGGAAGGTACCGTGAAAAAAAAGAAAGAGGGTGTTCGTGATGATAACGCGCAGCATGCGGTGTTCAACAAACAAGTGCC
GTTTTTTGTGCCCTCGTTTTCTGAAGCGGAAGAGCGCGCAGTCTGCGATGTGTTGCGTTCAGGATGGATTACGACGGGAA
CACAAGCACTCGCGTTTGAAAAAGAGTTTGCCGCGTATGTGGGTGCTCCCTATGCGTGTGCGGTTAACTCAGCTACCAGT
GGTTTGCTTCTCACCTTTGATGCAATGGGCATTGGGCCGGATAGTAAGATACTTACCAGTCCTTATACGTTTGTGTCTAC
GGCGAGCTCTGCACTCCACCTAGGTGCGCAGGTGGTGTACGCCGATATCGAGCGCGACTCTTATAATATCAGTGCAGAGT
GTGTTGAAGCGTGTTTAAAAAAGGATGCGCGCATCCGTGCTATTGTACCCATCCATATTGCCGGGAATGTATGCAATATG
CGTGATCTCAATGCTCTTGCGCGTAAGTATCAAGTGGCAGTGGTGGAAGATGCAGCACACGCTTTTCCATCGAAGACTGC
GTGTGGGTATGCAGGCACACTGTCACATGCGGGGGTATTTTCCTTTTATGCCACCAAGCCGTTAACCACCGGTGAAGGAG
GTATGGTTTGCACAAATGATGCGAAGCTTGCAGCGCGTATTGCGTGTTTGCGTTCACATGGCATTGACCGGGCTATTTGG
GATCGGTACACAAATGGCACCGCACCGTGGCGTTATGACGTAACAAGCCTTGGGTGGAAGTGTAACCTGCCGGATATTTT
AGCAGCAATTGGACGCGTACAGTTGCAGAAGGCGGCGCATCTTTTTGCACAACGCGCGCGTATTGCCGCCGCGTTCACGC
GTGCTTTTTCTCGTTATGAATTTTTTTGTACTCCGCCTGATGGGGATGGAAACGCGTGGCATTTGTATTTGTTGCGCTTA
GTTCCTGGAACGCTTTCTGTTTCTCGGGACGAGTTCGTCAGATTATTGCAGGAACGGGGATTGGGCGTTTCTATGCATTT
TATTCCTCATTTCGAGATGACGTTTTTTAAGAAAAGTCTGTGTGTACGAGCGGAAGATTTCCCTGAGTGTGCGCACAAGT
ATCAGCACACGCTTACGCTTCCGTTGTGGCCGGGAATGGATGACAGTTGCGTGGCGTATGTGATAGAGACCGTGGTGCGC
ACCGCACAAGAATGTGCAAAGGGAAGAGCATATATATGA

Upstream 100 bases:

>100_bases
AAGGTGCGGTACCGGCACAAAGAAGGACTTGTCCGCGTGCTATGCGACTCGTGCGCGACACTGAAACAGCGGTATATGCC
AAATAGCGAGGCATAGGAAA

Downstream 100 bases:

>100_bases
GCGTGTTCGTTTCAGACGGTGCGCGCACAGGGAGCGTCTATGCACAGCTTGTCCGTGCGCCGCGCGTTGCAGGATTGCTG
CTGAACATAGATATTCCCTC

Product: spore coat polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MEGTVKKKKEGVRDDNAQHAVFNKQVPFFVPSFSEAEERAVCDVLRSGWITTGTQALAFEKEFAAYVGAPYACAVNSATS
GLLLTFDAMGIGPDSKILTSPYTFVSTASSALHLGAQVVYADIERDSYNISAECVEACLKKDARIRAIVPIHIAGNVCNM
RDLNALARKYQVAVVEDAAHAFPSKTACGYAGTLSHAGVFSFYATKPLTTGEGGMVCTNDAKLAARIACLRSHGIDRAIW
DRYTNGTAPWRYDVTSLGWKCNLPDILAAIGRVQLQKAAHLFAQRARIAAAFTRAFSRYEFFCTPPDGDGNAWHLYLLRL
VPGTLSVSRDEFVRLLQERGLGVSMHFIPHFEMTFFKKSLCVRAEDFPECAHKYQHTLTLPLWPGMDDSCVAYVIETVVR
TAQECAKGRAYI

Sequences:

>Translated_412_residues
MEGTVKKKKEGVRDDNAQHAVFNKQVPFFVPSFSEAEERAVCDVLRSGWITTGTQALAFEKEFAAYVGAPYACAVNSATS
GLLLTFDAMGIGPDSKILTSPYTFVSTASSALHLGAQVVYADIERDSYNISAECVEACLKKDARIRAIVPIHIAGNVCNM
RDLNALARKYQVAVVEDAAHAFPSKTACGYAGTLSHAGVFSFYATKPLTTGEGGMVCTNDAKLAARIACLRSHGIDRAIW
DRYTNGTAPWRYDVTSLGWKCNLPDILAAIGRVQLQKAAHLFAQRARIAAAFTRAFSRYEFFCTPPDGDGNAWHLYLLRL
VPGTLSVSRDEFVRLLQERGLGVSMHFIPHFEMTFFKKSLCVRAEDFPECAHKYQHTLTLPLWPGMDDSCVAYVIETVVR
TAQECAKGRAYI
>Mature_412_residues
MEGTVKKKKEGVRDDNAQHAVFNKQVPFFVPSFSEAEERAVCDVLRSGWITTGTQALAFEKEFAAYVGAPYACAVNSATS
GLLLTFDAMGIGPDSKILTSPYTFVSTASSALHLGAQVVYADIERDSYNISAECVEACLKKDARIRAIVPIHIAGNVCNM
RDLNALARKYQVAVVEDAAHAFPSKTACGYAGTLSHAGVFSFYATKPLTTGEGGMVCTNDAKLAARIACLRSHGIDRAIW
DRYTNGTAPWRYDVTSLGWKCNLPDILAAIGRVQLQKAAHLFAQRARIAAAFTRAFSRYEFFCTPPDGDGNAWHLYLLRL
VPGTLSVSRDEFVRLLQERGLGVSMHFIPHFEMTFFKKSLCVRAEDFPECAHKYQHTLTLPLWPGMDDSCVAYVIETVVR
TAQECAKGRAYI

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=381, Percent_Identity=33.8582677165354, Blast_Score=211, Evalue=7e-56,
Organism=Escherichia coli, GI2367285, Length=280, Percent_Identity=31.4285714285714, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 45296; Mature: 45296

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGTVKKKKEGVRDDNAQHAVFNKQVPFFVPSFSEAEERAVCDVLRSGWITTGTQALAFE
CCCCCCHHHCCCCCCCCCHHEECCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
KEFAAYVGAPYACAVNSATSGLLLTFDAMGIGPDSKILTSPYTFVSTASSALHLGAQVVY
HHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHCEEEEE
ADIERDSYNISAECVEACLKKDARIRAIVPIHIAGNVCNMRDLNALARKYQVAVVEDAAH
EEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHEEEEEEHHHH
AFPSKTACGYAGTLSHAGVFSFYATKPLTTGEGGMVCTNDAKLAARIACLRSHGIDRAIW
HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHH
DRYTNGTAPWRYDVTSLGWKCNLPDILAAIGRVQLQKAAHLFAQRARIAAAFTRAFSRYE
HHCCCCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
FFCTPPDGDGNAWHLYLLRLVPGTLSVSRDEFVRLLQERGLGVSMHFIPHFEMTFFKKSL
EEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
CVRAEDFPECAHKYQHTLTLPLWPGMDDSCVAYVIETVVRTAQECAKGRAYI
HCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEGTVKKKKEGVRDDNAQHAVFNKQVPFFVPSFSEAEERAVCDVLRSGWITTGTQALAFE
CCCCCCHHHCCCCCCCCCHHEECCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH
KEFAAYVGAPYACAVNSATSGLLLTFDAMGIGPDSKILTSPYTFVSTASSALHLGAQVVY
HHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHCEEEEE
ADIERDSYNISAECVEACLKKDARIRAIVPIHIAGNVCNMRDLNALARKYQVAVVEDAAH
EEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHEEEEEEHHHH
AFPSKTACGYAGTLSHAGVFSFYATKPLTTGEGGMVCTNDAKLAARIACLRSHGIDRAIW
HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHH
DRYTNGTAPWRYDVTSLGWKCNLPDILAAIGRVQLQKAAHLFAQRARIAAAFTRAFSRYE
HHCCCCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
FFCTPPDGDGNAWHLYLLRLVPGTLSVSRDEFVRLLQERGLGVSMHFIPHFEMTFFKKSL
EEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
CVRAEDFPECAHKYQHTLTLPLWPGMDDSCVAYVIETVVRTAQECAKGRAYI
HCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]