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The map label for this gene is 189025289

Identifier: 189025289

GI number: 189025289

Start: 64127

End: 64363

Strand: Direct

Name: 189025289

Synonym: TPASS_0055

Alternate gene names: NA

Gene position: 64127-64363 (Clockwise)

Preceding gene: 189025288

Following gene: 189025290

Centisome position: 5.63

GC content: 57.81

Gene sequence:

>237_bases
ATGAATCAGATCCGCCTGTTTGCCCAGAGTGCGCTTGTGAGCGTCATGGGTATGGGGATGGTTTTTGCCTTCCTCCTTTT
GCTCATATGCGTTGTGCGCTGTGTGGGCGCGCTTGTCTCTTCTTTCGGCTGGGATCGCGGTCCTGACGAAGGTGTCGGCG
CTGCAGTCCCTGCAGGAGGAGCACTCGCCGCGGCTATCGCAGTCGCCGTTCATGAGAAGGCAAGGAGTACTTCATGA

Upstream 100 bases:

>100_bases
TGTTGTCGCGTAGGAAAACTTGTAAAGAGCTTGCACAAAGCGTCTTTTTTTTTTACCCTCGACCCCGTTCGCCTGAATTC
ATCACGTAGGAGTTGCCCGC

Downstream 100 bases:

>100_bases
GTACCCCGGTTCGCATTAGCGAAATGGTCCTACGTGATGCGCATCAGTCTTTGCACGCTACGCGCATGACTACCGAAGAC
ATGCTCCCTATTTGTGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MNQIRLFAQSALVSVMGMGMVFAFLLLLICVVRCVGALVSSFGWDRGPDEGVGAAVPAGGALAAAIAVAVHEKARSTS

Sequences:

>Translated_78_residues
MNQIRLFAQSALVSVMGMGMVFAFLLLLICVVRCVGALVSSFGWDRGPDEGVGAAVPAGGALAAAIAVAVHEKARSTS
>Mature_78_residues
MNQIRLFAQSALVSVMGMGMVFAFLLLLICVVRCVGALVSSFGWDRGPDEGVGAAVPAGGALAAAIAVAVHEKARSTS

Specific function: Unknown

COG id: COG3630

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y055_TREPA (O83094)

Other databases:

- EMBL:   AE000520
- PIR:   A71373
- RefSeq:   NP_218495.1
- ProteinModelPortal:   O83094
- IntAct:   O83094
- GeneID:   2611419
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0055
- NMPDR:   fig|243276.1.peg.54
- TIGR:   TP_0055
- HOGENOM:   HBG250992
- ProtClustDB:   CLSK2300122
- BioCyc:   TPAL243276:TP_0055-MONOMER
- InterPro:   IPR005899
- TIGRFAMs:   TIGR01195

Pfam domain/function: PF04277 OAD_gamma

EC number: NA

Molecular weight: Translated: 7935; Mature: 7935

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1fe7eb88)-; HASH(0x1f2b16b0)-;

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQIRLFAQSALVSVMGMGMVFAFLLLLICVVRCVGALVSSFGWDRGPDEGVGAAVPAGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
ALAAAIAVAVHEKARSTS
HHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MNQIRLFAQSALVSVMGMGMVFAFLLLLICVVRCVGALVSSFGWDRGPDEGVGAAVPAGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
ALAAAIAVAVHEKARSTS
HHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876