| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is 189025284
Identifier: 189025284
GI number: 189025284
Start: 58816
End: 59424
Strand: Reverse
Name: 189025284
Synonym: TPASS_0050
Alternate gene names: NA
Gene position: 59424-58816 (Counterclockwise)
Preceding gene: 189025287
Following gene: 189025283
Centisome position: 5.22
GC content: 53.37
Gene sequence:
>609_bases GTGAAAAAGCGATTTATTCCGTACAATGTGATCCGTGATGAGGGTTTCGGTATGGCCCGGCGCATCGTGGCAGACAGGTT CGTGCCAACGGTTATGTACGTCCCCATACGGGGTGGAGTATATCTGGGTAACGTGCTCAATGAGTATTTAACCATCGCGT ACAAGGCAGAGCCTCCTATCCTGTACGCAGCGGTAGTTGCTCACTCGCACTGTGATTTGCGTAAGCGGCGCGTCATCAGC GTAGATGGCTGGACCTACCCTCCTGAGTACCTACGCGTCGGGGATAAGGTGCTCATCGTAGATGATATCTTCGATTCAGG CGCAACCATCAACTACATCGCTTCCCTGCTTATGCAAAAGGGCCTTGCGCGTGGCGACATCCGCGTGGCTGTCTTCAATT ACAAAGTATTCGTGGGAGAAAAACAGCCCCCGGTGTTGCCGGACTACTGGTGCATCAAGCACGAGGTACGTAGCGAGGCA GATAACGAGTGGTTCCATTACATGAGCCACGAGCTCTCTGGGCTTACTGCAGCGGAGCTCGAGCAGTACTACTACGCGCA GAACCCTGCCCTGCGCAAAACGTTGGCTGATATCAACAATCAGCTATAG
Upstream 100 bases:
>100_bases GACAGTTCCAGGCCACGACACGAATAGAAAAAGAGCTTGCCATGATGCTAAAAAAGCATTAGATGTAGGGTGTTTTCGTG CTCGTGCAGGAGAGGCTAAC
Downstream 100 bases:
>100_bases CAGCACGGAAAAGTCCTCCCGCTTTTCCCTCAGCGCGGGGGCCAAGCCAGTGCTCGCTCCTGGCCAGGGTTGGGGCTCGT GTGCCCTCTTGGTCCTCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKKRFIPYNVIRDEGFGMARRIVADRFVPTVMYVPIRGGVYLGNVLNEYLTIAYKAEPPILYAAVVAHSHCDLRKRRVIS VDGWTYPPEYLRVGDKVLIVDDIFDSGATINYIASLLMQKGLARGDIRVAVFNYKVFVGEKQPPVLPDYWCIKHEVRSEA DNEWFHYMSHELSGLTAAELEQYYYAQNPALRKTLADINNQL
Sequences:
>Translated_202_residues MKKRFIPYNVIRDEGFGMARRIVADRFVPTVMYVPIRGGVYLGNVLNEYLTIAYKAEPPILYAAVVAHSHCDLRKRRVIS VDGWTYPPEYLRVGDKVLIVDDIFDSGATINYIASLLMQKGLARGDIRVAVFNYKVFVGEKQPPVLPDYWCIKHEVRSEA DNEWFHYMSHELSGLTAAELEQYYYAQNPALRKTLADINNQL >Mature_202_residues MKKRFIPYNVIRDEGFGMARRIVADRFVPTVMYVPIRGGVYLGNVLNEYLTIAYKAEPPILYAAVVAHSHCDLRKRRVIS VDGWTYPPEYLRVGDKVLIVDDIFDSGATINYIASLLMQKGLARGDIRVAVFNYKVFVGEKQPPVLPDYWCIKHEVRSEA DNEWFHYMSHELSGLTAAELEQYYYAQNPALRKTLADINNQL
Specific function: Unknown
COG id: COG2236
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23208; Mature: 23208
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFIPYNVIRDEGFGMARRIVADRFVPTVMYVPIRGGVYLGNVLNEYLTIAYKAEPPI CCCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHEEEEEECCCCE LYAAVVAHSHCDLRKRRVISVDGWTYPPEYLRVGDKVLIVDDIFDSGATINYIASLLMQK EEEHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHC GLARGDIRVAVFNYKVFVGEKQPPVLPDYWCIKHEVRSEADNEWFHYMSHELSGLTAAEL CCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH EQYYYAQNPALRKTLADINNQL HHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure MKKRFIPYNVIRDEGFGMARRIVADRFVPTVMYVPIRGGVYLGNVLNEYLTIAYKAEPPI CCCCCCCCEEEECCCCHHHHHHHHHHHCCEEEEEECCCCEEHHHHHHHHEEEEEECCCCE LYAAVVAHSHCDLRKRRVISVDGWTYPPEYLRVGDKVLIVDDIFDSGATINYIASLLMQK EEEHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHC GLARGDIRVAVFNYKVFVGEKQPPVLPDYWCIKHEVRSEADNEWFHYMSHELSGLTAAEL CCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHH EQYYYAQNPALRKTLADINNQL HHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA