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The map label for this gene is 189025273

Identifier: 189025273

GI number: 189025273

Start: 46752

End: 46910

Strand: Direct

Name: 189025273

Synonym: TPASS_0039

Alternate gene names: NA

Gene position: 46752-46910 (Clockwise)

Preceding gene: 189025270

Following gene: 189025274

Centisome position: 4.1

GC content: 49.06

Gene sequence:

>159_bases
GTGAGGCAGGAGAATAAACCGTGTCAACAGTTTTATTTTGTTTTGGATGAAAAAGCGTTGCAGTCCCCACTGCGGGAGAA
CCCTTCCAAAAACGTGCGCACTATCCCTGATGCGGGCGATGAAAATTCCTCATTTGGGCATGCCCGTGTGATTGCGTGA

Upstream 100 bases:

>100_bases
CGTTGAGTATTTTCATCATGAACTGCCTGGGGCTGAGGCTTTGCGTGTGCATGAGACGCTCCTTACGGAGAGACTTAAAA
TGGCGCGGACTGCAGCCAGT

Downstream 100 bases:

>100_bases
ACAGCAAGTGCAGTCCGTAGATCATTTTGGATGTGTCGCGTATAGTCCGCGGCGTGAAATATCGTGCCATTACGTACTCG
TATGTCTTTGCTTTTGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MRQENKPCQQFYFVLDEKALQSPLRENPSKNVRTIPDAGDENSSFGHARVIA

Sequences:

>Translated_52_residues
MRQENKPCQQFYFVLDEKALQSPLRENPSKNVRTIPDAGDENSSFGHARVIA
>Mature_52_residues
MRQENKPCQQFYFVLDEKALQSPLRENPSKNVRTIPDAGDENSSFGHARVIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y039_TREPA (O83081)

Other databases:

- EMBL:   AE000520
- PIR:   F71373
- RefSeq:   NP_218479.1
- ProteinModelPortal:   O83081
- IntAct:   O83081
- GeneID:   2610737
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0039
- NMPDR:   fig|243276.1.peg.38
- TIGR:   TP_0039
- HOGENOM:   HBG731987
- ProtClustDB:   CLSK2300118
- BioCyc:   TPAL243276:TP_0039-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5934; Mature: 5934

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQENKPCQQFYFVLDEKALQSPLRENPSKNVRTIPDAGDENSSFGHARVIA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MRQENKPCQQFYFVLDEKALQSPLRENPSKNVRTIPDAGDENSSFGHARVIA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876