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The map label for this gene is 189025251

Identifier: 189025251

GI number: 189025251

Start: 18401

End: 19348

Strand: Direct

Name: 189025251

Synonym: TPASS_0017

Alternate gene names: NA

Gene position: 18401-19348 (Clockwise)

Preceding gene: 189025250

Following gene: 189025252

Centisome position: 1.61

GC content: 48.21

Gene sequence:

>948_bases
ATGGTTGCACGATCGATTCGTGTAGAGCTTGAGTCAGCACTGGATTTACTGAAGCAGGGGGATCTGCGCCAGGCACACCA
GGATTTGCAGGATTTGCTTCAAAAAGAGCTAGACAATCGGGATGTTTTGTACGCGCTTACCGGTATTCGCTTTTGGGAGG
ATCGGATGCAGCGTGTACATACTATCTCTGGCGGTCTTAGTCAGGGTGAGTATCTTGTTGGACAATGGGGTGCGTTCGTT
GCATATATGCAAAAACGTGGTGGCGTTGTCGAACCTGTTATGTATGCATTGCGCTGTTGTGTGTTCACTTACGCATTGCG
GTTTTATGGGAGTCTTATCACCGGTGATGCGCGCGAGCATCCCGCGGAAGTCTATCGTAAGACTGGGCTGTGCTATAAAG
CATTGGGCAATTACGATGCTGCGCGTGAATGCCTTGAGTTTGCAGTCTCTTTGGAGCCAGACTCTTCTGCAATTCTTGCT
GAACTTGCTGATGCATACGCTCTTGCGGGAGATGAGCGCTGGTCGAAGTTGTATTTTCGCGAGGCCTTGTTCAAGGGTGC
TTCAAAGCTCGAGCTCAATTTACTTGAGTCTGATCTTATTTTCAGTCTCATTGAACGGGTGAAGTCGTATGGGTTTTCTG
GCGTGGAGTTGTTAGAGTGGTTGCCGGTGTACGGCACCCTCGAAGGAGTCCTTACCGCAAAGCGTGAGCTGCGTGCAGTA
GAGATTGGAAAGCTGAAACAGGCGATTTATTCCCTCGAAAACGATTTAAGGAATGAGAAAGTTTCGGCTGAAAGGCGGCT
CCTGCGTCCTCGTCTCATCAATCATTTTTTCTGGCTCGTTGATCACTATGTGAATGTGCAAGAAGACAAGAGGAACATCG
ACGAAGTGTTACTCAAAATTAAATTGCTTGATGAAGCGGTTTATCATCGCTATGTGAGGATAGCGTGA

Upstream 100 bases:

>100_bases
ACACTGCGAGTAGCTCGTGTTTATTTACATAGCGTTGGTTTTGTTTTTGAAAAAGTACTTTCGTTGACGTGGCGCTTTGA
TACCGATACAATATCCCGCT

Downstream 100 bases:

>100_bases
AAGTGAGGGTGAAGTAATGTCAGAACACATAGAACACGACGTTCGGGAAATGCTCAATGAAGAAAAATGGACACGCGCGA
CCTTACCGCGTATTCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MVARSIRVELESALDLLKQGDLRQAHQDLQDLLQKELDNRDVLYALTGIRFWEDRMQRVHTISGGLSQGEYLVGQWGAFV
AYMQKRGGVVEPVMYALRCCVFTYALRFYGSLITGDAREHPAEVYRKTGLCYKALGNYDAARECLEFAVSLEPDSSAILA
ELADAYALAGDERWSKLYFREALFKGASKLELNLLESDLIFSLIERVKSYGFSGVELLEWLPVYGTLEGVLTAKRELRAV
EIGKLKQAIYSLENDLRNEKVSAERRLLRPRLINHFFWLVDHYVNVQEDKRNIDEVLLKIKLLDEAVYHRYVRIA

Sequences:

>Translated_315_residues
MVARSIRVELESALDLLKQGDLRQAHQDLQDLLQKELDNRDVLYALTGIRFWEDRMQRVHTISGGLSQGEYLVGQWGAFV
AYMQKRGGVVEPVMYALRCCVFTYALRFYGSLITGDAREHPAEVYRKTGLCYKALGNYDAARECLEFAVSLEPDSSAILA
ELADAYALAGDERWSKLYFREALFKGASKLELNLLESDLIFSLIERVKSYGFSGVELLEWLPVYGTLEGVLTAKRELRAV
EIGKLKQAIYSLENDLRNEKVSAERRLLRPRLINHFFWLVDHYVNVQEDKRNIDEVLLKIKLLDEAVYHRYVRIA
>Mature_315_residues
MVARSIRVELESALDLLKQGDLRQAHQDLQDLLQKELDNRDVLYALTGIRFWEDRMQRVHTISGGLSQGEYLVGQWGAFV
AYMQKRGGVVEPVMYALRCCVFTYALRFYGSLITGDAREHPAEVYRKTGLCYKALGNYDAARECLEFAVSLEPDSSAILA
ELADAYALAGDERWSKLYFREALFKGASKLELNLLESDLIFSLIERVKSYGFSGVELLEWLPVYGTLEGVLTAKRELRAV
EIGKLKQAIYSLENDLRNEKVSAERRLLRPRLINHFFWLVDHYVNVQEDKRNIDEVLLKIKLLDEAVYHRYVRIA

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36223; Mature: 36223

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARSIRVELESALDLLKQGDLRQAHQDLQDLLQKELDNRDVLYALTGIRFWEDRMQRVH
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
TISGGLSQGEYLVGQWGAFVAYMQKRGGVVEPVMYALRCCVFTYALRFYGSLITGDAREH
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAEVYRKTGLCYKALGNYDAARECLEFAVSLEPDSSAILAELADAYALAGDERWSKLYFR
HHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EALFKGASKLELNLLESDLIFSLIERVKSYGFSGVELLEWLPVYGTLEGVLTAKRELRAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGKLKQAIYSLENDLRNEKVSAERRLLRPRLINHFFWLVDHYVNVQEDKRNIDEVLLKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KLLDEAVYHRYVRIA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MVARSIRVELESALDLLKQGDLRQAHQDLQDLLQKELDNRDVLYALTGIRFWEDRMQRVH
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
TISGGLSQGEYLVGQWGAFVAYMQKRGGVVEPVMYALRCCVFTYALRFYGSLITGDAREH
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAEVYRKTGLCYKALGNYDAARECLEFAVSLEPDSSAILAELADAYALAGDERWSKLYFR
HHHHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
EALFKGASKLELNLLESDLIFSLIERVKSYGFSGVELLEWLPVYGTLEGVLTAKRELRAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGKLKQAIYSLENDLRNEKVSAERRLLRPRLINHFFWLVDHYVNVQEDKRNIDEVLLKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KLLDEAVYHRYVRIA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA