| Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
|---|---|
| Accession | NC_010741 |
| Length | 1,139,457 |
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The map label for this gene is lon1 [H]
Identifier: 189025250
GI number: 189025250
Start: 15740
End: 18313
Strand: Direct
Name: lon1 [H]
Synonym: TPASS_0016
Alternate gene names: 189025250
Gene position: 15740-18313 (Clockwise)
Preceding gene: 189025249
Following gene: 189025251
Centisome position: 1.38
GC content: 50.27
Gene sequence:
>2574_bases TTGCTGGGGAACTTGATGTTGGGGCCCTATTGCCGTAGCTCGCTCTGGCGAGAGCTTTCCTGGCAAGAAGTTACGGGTAT CGTTGCTCCTGACACTATTGCGTATCTGAAAGCCCGTGCGCAGGATCACCCCTTTTTGCTAGCGCATGAACGTGCCTGCG CTGCGATACGTCTTGGGATGAGAATGTACGGTGACGGCTACAATATCTGTGTGATTGGCGCGTCAGGCACCGGGAAGCGC ACTACGCTCCAATATCTATTAAAAGATTTTGTACCTCGTCCCGAGCAAATGTGGGATATAGCGTATGCATACAATTTTGT GCATCCGCACGAACCGCAGGTGCTGCAGTTTCCGGCGGGAGAAGGGATGCCTTTTGCTACGGCGTTGAGGAGATCGGTTA ACGCTATTCTCAATACAGCACAGGATATTGTGAAAAGTGATGCCTTCTTACGTGAGCGGCGCACATTGCTGGCTGATATT GAAACACGTGAGTGTGCTGAGCTTTCACGTATTGAAGCGGAGTTGTATACGCGTGGGTTTCGTGTGAGATGGCATAGGAA ACGTGGTACGTACTCCTTTGATTTAGTTCCCCTATTAAAGGGAAAAGACAGTAGCTTTGAAGCGCTGCACGATTTAGCTT CCCGCGCGAAGCTTTCTAGATGTGTAGTACACGAACTCCATGCGCGATATCGTCTTTCCTGTGATGAGGTTTCTTCGCTG CTCCATACGTTGCGCACTGCGCGGCGGGCCGCGCGTAGGCGTCTTGCGCAGTACTACCGTGCGCGTTTGCGGTTAATTAT CCTCGAGCAGATGGCCTGTATTAAAAAACGCGTGGCGTGTTATGCACCGGTTTTTTCCCCTCCACCTGTTTCGTGTGCGG CGGAACAGACGGAAAGGGAGAAGACTTCCTCTTCTCGCCTCATTGAGGTGCCGCATGAATTTGAAGAAATGCGTGCGCGC ATCATATCGTACATAGAGCGGATACAAACCGATGTGCAGGTGCGGGTACAGTGTTTAATGTCAATGCGTATTTCTGCACT AGTAAAAAAGCGGTTTTTCGATCGCTATACCTTAAATTTCGTGTGTGTGCACACAGAACATGCGGGGTATGTGTTTACGG AGCATCAGCCGAATTTGGCGAATTTATGTGGATCGATTGAAAGCAAGGGGAATGAAGGGGATACGCTGGAGAATGGGCAT TTACGCATTCGTGCAGGTGCGCTGCATCGAGCGCATGCAGGTGTACTCATCGTGCAGCTCGAAGATCTACTGGCGGAGGA AGAAGCATGGACACATTTGAAGCGTGCGCTGCGTACCAAGCAGGTGTTACTCCCAGCGGGTAGTTCCCAGTCCCAAGGTA TGTTGCGGCCTGAAGGAGTTCCGCTCACATGCAAGCTTGTTTTGGTTGGCGAGCCATGCTCTTTCGAACGTCTATCTCAG GAAGATTCCTCGTTCCGAGAACTATTTAAGGTGTGTGCAGAATTTGATACGAGCATGCCGAATTCTGATAAGAATCAAGT TGCTTTGATAGCCTACCTTGATAGAGTTGTGGCGCGTTATGGCACCTTCTCACTTGATTCCTCAGCGTACGCGCGATTGT TAGCATATGCGGAAGAACTGGCAGAGAGTCATACACGGCTCAGTACTTCTTTTGTACAAATTGCAGATTTAGTATTGGAG TCTCATGCAGTGGCCGTGGATATGCATCCAGATGTGTCGGTGATTACTGCGCATGTGGTGCAGGAAGCGCTGAATCGCAG GCAGTACGTGTGTTCCCGCGCGCGGGAGCGTTTTCAGCGCATGATAGCCTGTGGAGAGTTATTGGTAGAGGTACAGGGAT ATCGAATAGGGAGAATTAACGCGCTGGCAATCGAAGAACATTGCGGCCATAGCTTTGGCATAGTAATTTCGTTAACGGCA CAGGCATCCGCGGGTAAGGAAGGAGTGATGAATATTGAGCGGGAGGCAGGTCTTTCGGGGGAAATTTATGATAAGGCGCA TTTAATCATCACTTCGCTATTGCGTGAGAAGTGCTTGTCTGCTTTTGCAGATGCTGCATTTGATCCAGCTGTGGATGACC TTGGAAAGGGGCAGGATAGTTTTCCACTGTGTCTTTCTGCAGCGCTTTGTTTTGAACAGTCGTATCACGGGATTGATGGG GATTCGGCGTCTGCTGCAGAATTTTTAGTATTGCTTTCTGCGATTGGCCGGTTTCCTCTTCGGCAGGACCGCGCAATAAC AGGAAGTGTGAACCAGTTGGGACAAGTGCAAGCTATTGGAGGAGTGAGCGAGAAGATCAGTGGCTTTTATGACGTCTGTG CTCTGAACGGACTGACGGGAATGCAGGGAGTTTTGATCCCAAAGAGTAGTTGTGCACAATTGTTTTTGCCTGAACGTGTG CAGGATGCGGTGCGTGCTGGTACGTTTCACGTGTGGGCGGTATGCACAATTGATGATGCGCTGGAATTGATGGTGCCGGA CGATTTGAAAGAGCAGGGAAGTGCTCAGCTCTACCAGTGTGTGCGTGCGCGTTTGCGGGATTTTTATGTCACAGTGAAAG GACACTGCGAGTAG
Upstream 100 bases:
>100_bases GGCAGACAAGCGAGTATCTGCGTGCATGGTTCTCGTGTGGGTATATTTGGGGAGATACATCCGCAGGTGCTGAGTAATTG GGATATCCGCATGCCGTGCT
Downstream 100 bases:
>100_bases CTCGTGTTTATTTACATAGCGTTGGTTTTGTTTTTGAAAAAGTACTTTCGTTGACGTGGCGCTTTGATACCGATACAATA TCCCGCTATGGTTGCACGAT
Product: ATP-dependent protease LA
Products: NA
Alternate protein names: ATP-dependent protease La homolog [H]
Number of amino acids: Translated: 857; Mature: 857
Protein sequence:
>857_residues MLGNLMLGPYCRSSLWRELSWQEVTGIVAPDTIAYLKARAQDHPFLLAHERACAAIRLGMRMYGDGYNICVIGASGTGKR TTLQYLLKDFVPRPEQMWDIAYAYNFVHPHEPQVLQFPAGEGMPFATALRRSVNAILNTAQDIVKSDAFLRERRTLLADI ETRECAELSRIEAELYTRGFRVRWHRKRGTYSFDLVPLLKGKDSSFEALHDLASRAKLSRCVVHELHARYRLSCDEVSSL LHTLRTARRAARRRLAQYYRARLRLIILEQMACIKKRVACYAPVFSPPPVSCAAEQTEREKTSSSRLIEVPHEFEEMRAR IISYIERIQTDVQVRVQCLMSMRISALVKKRFFDRYTLNFVCVHTEHAGYVFTEHQPNLANLCGSIESKGNEGDTLENGH LRIRAGALHRAHAGVLIVQLEDLLAEEEAWTHLKRALRTKQVLLPAGSSQSQGMLRPEGVPLTCKLVLVGEPCSFERLSQ EDSSFRELFKVCAEFDTSMPNSDKNQVALIAYLDRVVARYGTFSLDSSAYARLLAYAEELAESHTRLSTSFVQIADLVLE SHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQRMIACGELLVEVQGYRIGRINALAIEEHCGHSFGIVISLTA QASAGKEGVMNIEREAGLSGEIYDKAHLIITSLLREKCLSAFADAAFDPAVDDLGKGQDSFPLCLSAALCFEQSYHGIDG DSASAAEFLVLLSAIGRFPLRQDRAITGSVNQLGQVQAIGGVSEKISGFYDVCALNGLTGMQGVLIPKSSCAQLFLPERV QDAVRAGTFHVWAVCTIDDALELMVPDDLKEQGSAQLYQCVRARLRDFYVTVKGHCE
Sequences:
>Translated_857_residues MLGNLMLGPYCRSSLWRELSWQEVTGIVAPDTIAYLKARAQDHPFLLAHERACAAIRLGMRMYGDGYNICVIGASGTGKR TTLQYLLKDFVPRPEQMWDIAYAYNFVHPHEPQVLQFPAGEGMPFATALRRSVNAILNTAQDIVKSDAFLRERRTLLADI ETRECAELSRIEAELYTRGFRVRWHRKRGTYSFDLVPLLKGKDSSFEALHDLASRAKLSRCVVHELHARYRLSCDEVSSL LHTLRTARRAARRRLAQYYRARLRLIILEQMACIKKRVACYAPVFSPPPVSCAAEQTEREKTSSSRLIEVPHEFEEMRAR IISYIERIQTDVQVRVQCLMSMRISALVKKRFFDRYTLNFVCVHTEHAGYVFTEHQPNLANLCGSIESKGNEGDTLENGH LRIRAGALHRAHAGVLIVQLEDLLAEEEAWTHLKRALRTKQVLLPAGSSQSQGMLRPEGVPLTCKLVLVGEPCSFERLSQ EDSSFRELFKVCAEFDTSMPNSDKNQVALIAYLDRVVARYGTFSLDSSAYARLLAYAEELAESHTRLSTSFVQIADLVLE SHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQRMIACGELLVEVQGYRIGRINALAIEEHCGHSFGIVISLTA QASAGKEGVMNIEREAGLSGEIYDKAHLIITSLLREKCLSAFADAAFDPAVDDLGKGQDSFPLCLSAALCFEQSYHGIDG DSASAAEFLVLLSAIGRFPLRQDRAITGSVNQLGQVQAIGGVSEKISGFYDVCALNGLTGMQGVLIPKSSCAQLFLPERV QDAVRAGTFHVWAVCTIDDALELMVPDDLKEQGSAQLYQCVRARLRDFYVTVKGHCE >Mature_857_residues MLGNLMLGPYCRSSLWRELSWQEVTGIVAPDTIAYLKARAQDHPFLLAHERACAAIRLGMRMYGDGYNICVIGASGTGKR TTLQYLLKDFVPRPEQMWDIAYAYNFVHPHEPQVLQFPAGEGMPFATALRRSVNAILNTAQDIVKSDAFLRERRTLLADI ETRECAELSRIEAELYTRGFRVRWHRKRGTYSFDLVPLLKGKDSSFEALHDLASRAKLSRCVVHELHARYRLSCDEVSSL LHTLRTARRAARRRLAQYYRARLRLIILEQMACIKKRVACYAPVFSPPPVSCAAEQTEREKTSSSRLIEVPHEFEEMRAR IISYIERIQTDVQVRVQCLMSMRISALVKKRFFDRYTLNFVCVHTEHAGYVFTEHQPNLANLCGSIESKGNEGDTLENGH LRIRAGALHRAHAGVLIVQLEDLLAEEEAWTHLKRALRTKQVLLPAGSSQSQGMLRPEGVPLTCKLVLVGEPCSFERLSQ EDSSFRELFKVCAEFDTSMPNSDKNQVALIAYLDRVVARYGTFSLDSSAYARLLAYAEELAESHTRLSTSFVQIADLVLE SHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQRMIACGELLVEVQGYRIGRINALAIEEHCGHSFGIVISLTA QASAGKEGVMNIEREAGLSGEIYDKAHLIITSLLREKCLSAFADAAFDPAVDDLGKGQDSFPLCLSAALCFEQSYHGIDG DSASAAEFLVLLSAIGRFPLRQDRAITGSVNQLGQVQAIGGVSEKISGFYDVCALNGLTGMQGVLIPKSSCAQLFLPERV QDAVRAGTFHVWAVCTIDDALELMVPDDLKEQGSAQLYQCVRARLRDFYVTVKGHCE
Specific function: Unknown
COG id: COG1067
COG function: function code O; Predicted ATP-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S16 family [H]
Homologues:
Organism=Escherichia coli, GI1787188, Length=451, Percent_Identity=29.9334811529933, Blast_Score=186, Evalue=5e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008269 - InterPro: IPR001984 - InterPro: IPR020568 [H]
Pfam domain/function: PF05362 Lon_C [H]
EC number: 3.4.21.53
Molecular weight: Translated: 95803; Mature: 95803
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGNLMLGPYCRSSLWRELSWQEVTGIVAPDTIAYLKARAQDHPFLLAHERACAAIRLGM CCCCCEECHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH RMYGDGYNICVIGASGTGKRTTLQYLLKDFVPRPEQMWDIAYAYNFVHPHEPQVLQFPAG HHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEECCC EGMPFATALRRSVNAILNTAQDIVKSDAFLRERRTLLADIETRECAELSRIEAELYTRGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC RVRWHRKRGTYSFDLVPLLKGKDSSFEALHDLASRAKLSRCVVHELHARYRLSCDEVSSL EEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LHTLRTARRAARRRLAQYYRARLRLIILEQMACIKKRVACYAPVFSPPPVSCAAEQTERE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH KTSSSRLIEVPHEFEEMRARIISYIERIQTDVQVRVQCLMSMRISALVKKRFFDRYTLNF HCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE VCVHTEHAGYVFTEHQPNLANLCGSIESKGNEGDTLENGHLRIRAGALHRAHAGVLIVQL EEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHCCCEEEEEH EDLLAEEEAWTHLKRALRTKQVLLPAGSSQSQGMLRPEGVPLTCKLVLVGEPCSFERLSQ HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCC EDSSFRELFKVCAEFDTSMPNSDKNQVALIAYLDRVVARYGTFSLDSSAYARLLAYAEEL CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AESHTRLSTSFVQIADLVLESHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQR HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIACGELLVEVQGYRIGRINALAIEEHCGHSFGIVISLTAQASAGKEGVMNIEREAGLSG HHHHHHHHHHHCCEEECCEEEEEEHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCC EIYDKAHLIITSLLREKCLSAFADAAFDPAVDDLGKGQDSFPLCLSAALCFEQSYHGIDG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC DSASAAEFLVLLSAIGRFPLRQDRAITGSVNQLGQVQAIGGVSEKISGFYDVCALNGLTG CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCC MQGVLIPKSSCAQLFLPERVQDAVRAGTFHVWAVCTIDDALELMVPDDLKEQGSAQLYQC CCEEEECCCCHHHHCCCHHHHHHHHCCCEEEEEEEEECCHHHHCCCCCHHHCCCHHHHHH VRARLRDFYVTVKGHCE HHHHHHHEEEEEECCCC >Mature Secondary Structure MLGNLMLGPYCRSSLWRELSWQEVTGIVAPDTIAYLKARAQDHPFLLAHERACAAIRLGM CCCCCEECHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHH RMYGDGYNICVIGASGTGKRTTLQYLLKDFVPRPEQMWDIAYAYNFVHPHEPQVLQFPAG HHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEECCC EGMPFATALRRSVNAILNTAQDIVKSDAFLRERRTLLADIETRECAELSRIEAELYTRGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC RVRWHRKRGTYSFDLVPLLKGKDSSFEALHDLASRAKLSRCVVHELHARYRLSCDEVSSL EEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LHTLRTARRAARRRLAQYYRARLRLIILEQMACIKKRVACYAPVFSPPPVSCAAEQTERE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH KTSSSRLIEVPHEFEEMRARIISYIERIQTDVQVRVQCLMSMRISALVKKRFFDRYTLNF HCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE VCVHTEHAGYVFTEHQPNLANLCGSIESKGNEGDTLENGHLRIRAGALHRAHAGVLIVQL EEEEECCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHCCCEEEEEH EDLLAEEEAWTHLKRALRTKQVLLPAGSSQSQGMLRPEGVPLTCKLVLVGEPCSFERLSQ HHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHCC EDSSFRELFKVCAEFDTSMPNSDKNQVALIAYLDRVVARYGTFSLDSSAYARLLAYAEEL CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AESHTRLSTSFVQIADLVLESHAVAVDMHPDVSVITAHVVQEALNRRQYVCSRARERFQR HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MIACGELLVEVQGYRIGRINALAIEEHCGHSFGIVISLTAQASAGKEGVMNIEREAGLSG HHHHHHHHHHHCCEEECCEEEEEEHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCC EIYDKAHLIITSLLREKCLSAFADAAFDPAVDDLGKGQDSFPLCLSAALCFEQSYHGIDG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC DSASAAEFLVLLSAIGRFPLRQDRAITGSVNQLGQVQAIGGVSEKISGFYDVCALNGLTG CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHCCCHHHHHHHHHHHHHHCCCCC MQGVLIPKSSCAQLFLPERVQDAVRAGTFHVWAVCTIDDALELMVPDDLKEQGSAQLYQC CCEEEECCCCHHHHCCCHHHHHHHHCCCEEEEEEEEECCHHHHCCCCCHHHCCCHHHHHH VRARLRDFYVTVKGHCE HHHHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]