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The map label for this gene is pheT

Identifier: 189025249

GI number: 189025249

Start: 13963

End: 15777

Strand: Direct

Name: pheT

Synonym: TPASS_0015

Alternate gene names: 189025249

Gene position: 13963-15777 (Clockwise)

Preceding gene: 189025248

Following gene: 189025250

Centisome position: 1.23

GC content: 50.08

Gene sequence:

>1815_bases
ATGCCGAAAATTAGCATTCATGAGGCGTTGTTTTTTGAGCTGCTCGGTGAACGGTGCGACGATGATACGTTGGAGCGACG
TTTGCGAAGTGCTAAGGCTGAATTGGAGTGCAGCTCTTTTTCCGTGAGGGAAGATAAAGAGGGAGGGAGCCTTTCGCCAG
GAGGGGAGGTGTGCGATCCTGTGCAGAGGACGAGGGGTCAGGCCAGCTGTGTACGTGAGGGTGCGTTTGATGCGCGTCTT
TTAAAAATCGAACTTAACGACACAAATCGTCCGGATTTGTGGTCTACAGCAGGGCTTGCGCGCCTCTTGCGTGTTCACGC
AGGGGGGGCTTCGCGCGCAGCGCAGTATCGTGCATTTCTTTCAGATCGCTGTACGGTGCGCGACTCGTATGGGCGATGCG
TAGTAGTGGATGCGCGTTTGCAAACTATACGCCCTTTTATTGCTGGCTTTGTGGCTCGGGGTACTGGACTGAGCGAAGTA
AGACTGTGGGATCTAATACAAACACAGGAAAGACTCGCCAGTAATTTTGGACGTAGGAGGTGTACCCTTTCGCTGGGGTG
TTACCGTGCACAGGATATATGTTGGCCACTCGCATACCGCGCTGTCCTACTCGCAGAGGTAAGTTTCACGCCTCTCGGTA
TGTCCATGCCGCTGTCTGGTGAGCAGATTCTGACGCAACATCCGAAAGGGCGTGAATATGGTCATCTCCTCAAGGATTAT
TCTTTCGTTCCCTTATTAGTCGATGCTCGTGGTGAGGTGCTTTCGCTTATTCCGATCACTAATAGCGCGTCGCTGGGTGC
AGTAGTGACCGGGGATACAGAACTATTTATCGAGTGTAGTGGTACGGATATGTGCGCAGTGCTAGTAGCGGTGAATAGCC
TTGCGTGTGATCTTTCTGATATGGGTATGCAGATTGAACCTGTGCAAATTACCTATAGTTTTGACACCCCATGGGGGAGG
TCTGTTACTACCCCCTTTTATTTTCAAGAAAAAAGGGAGGTTGCGCACGAGCAGATAGATCGTCTTTTGGGGATGCCCTT
GCCTGTTGCAGATATAACCGAAGCCTTTGCAAGGATGGACTGTGCCGTGCAAGTTAAGCAGGGAACCTATGTCGTCGAGC
CTGCAGCGTACCGTAATGATTTTCTCCATGCGGTAGATCTGATTGAAGAAGTGATGCTGGGTAGAACGCTTGACCGTTTT
TCTCCGCAGGTTCCATGTTCTTTTACAGTGGGCAGACTGAGTGATCTGACCCTTTTGACGCGCAAAATTAAGCACCTTCT
AGTTGGATTTGGTTATCAGGAGATGATTTTTCATTATCTTGGCTCTGCCAGGGAGTTTTGCACGCGTATGCGATGCACGG
CAGATGATTTAATCGAGATAGAAAATCCTCTTACTGAAAGCTACCGATTCGTGCGCAGGTCTATCATTCCGTGTCTTCTG
TCAGCTGAGCTAAAGTCAGCACATGCGTTGTATCCACATCGTATTTTCGAAATTGGAAAGGTTGCCTTTTGCTCCCCTCA
TGGTGAACACGGTACATGCACGCAACAATCACTTGGATTCCTCAATGCCTCGCAGGAGGCAAGTTACAATGAGGTGGCGA
GCCTAGTTTCAGGACTTTTGTATTGTTTGAAACTTCCGTATCAGGTAGAGGAAGCGCAGGATCCGCGGTTTGTCTTAGGC
AGACAAGCGAGTATCTGCGTGCATGGTTCTCGTGTGGGTATATTTGGGGAGATACATCCGCAGGTGCTGAGTAATTGGGA
TATCCGCATGCCGTGCTTTGCTGGGGAACTTGATGTTGGGGCCCTATTGCCGTAG

Upstream 100 bases:

>100_bases
CACGTGTGCCGTGTAGTGGCATCCTCTGCAAAGACGGTGTGGTGGCTGGCCCTTGTGGTGTCCTTTTTTTGACCGTATAC
TGAGCACGGTCGGAGGGCTC

Downstream 100 bases:

>100_bases
CTCGCTCTGGCGAGAGCTTTCCTGGCAAGAAGTTACGGGTATCGTTGCTCCTGACACTATTGCGTATCTGAAAGCCCGTG
CGCAGGATCACCCCTTTTTG

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS

Number of amino acids: Translated: 604; Mature: 603

Protein sequence:

>604_residues
MPKISIHEALFFELLGERCDDDTLERRLRSAKAELECSSFSVREDKEGGSLSPGGEVCDPVQRTRGQASCVREGAFDARL
LKIELNDTNRPDLWSTAGLARLLRVHAGGASRAAQYRAFLSDRCTVRDSYGRCVVVDARLQTIRPFIAGFVARGTGLSEV
RLWDLIQTQERLASNFGRRRCTLSLGCYRAQDICWPLAYRAVLLAEVSFTPLGMSMPLSGEQILTQHPKGREYGHLLKDY
SFVPLLVDARGEVLSLIPITNSASLGAVVTGDTELFIECSGTDMCAVLVAVNSLACDLSDMGMQIEPVQITYSFDTPWGR
SVTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMDCAVQVKQGTYVVEPAAYRNDFLHAVDLIEEVMLGRTLDRF
SPQVPCSFTVGRLSDLTLLTRKIKHLLVGFGYQEMIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLL
SAELKSAHALYPHRIFEIGKVAFCSPHGEHGTCTQQSLGFLNASQEASYNEVASLVSGLLYCLKLPYQVEEAQDPRFVLG
RQASICVHGSRVGIFGEIHPQVLSNWDIRMPCFAGELDVGALLP

Sequences:

>Translated_604_residues
MPKISIHEALFFELLGERCDDDTLERRLRSAKAELECSSFSVREDKEGGSLSPGGEVCDPVQRTRGQASCVREGAFDARL
LKIELNDTNRPDLWSTAGLARLLRVHAGGASRAAQYRAFLSDRCTVRDSYGRCVVVDARLQTIRPFIAGFVARGTGLSEV
RLWDLIQTQERLASNFGRRRCTLSLGCYRAQDICWPLAYRAVLLAEVSFTPLGMSMPLSGEQILTQHPKGREYGHLLKDY
SFVPLLVDARGEVLSLIPITNSASLGAVVTGDTELFIECSGTDMCAVLVAVNSLACDLSDMGMQIEPVQITYSFDTPWGR
SVTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMDCAVQVKQGTYVVEPAAYRNDFLHAVDLIEEVMLGRTLDRF
SPQVPCSFTVGRLSDLTLLTRKIKHLLVGFGYQEMIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLL
SAELKSAHALYPHRIFEIGKVAFCSPHGEHGTCTQQSLGFLNASQEASYNEVASLVSGLLYCLKLPYQVEEAQDPRFVLG
RQASICVHGSRVGIFGEIHPQVLSNWDIRMPCFAGELDVGALLP
>Mature_603_residues
PKISIHEALFFELLGERCDDDTLERRLRSAKAELECSSFSVREDKEGGSLSPGGEVCDPVQRTRGQASCVREGAFDARLL
KIELNDTNRPDLWSTAGLARLLRVHAGGASRAAQYRAFLSDRCTVRDSYGRCVVVDARLQTIRPFIAGFVARGTGLSEVR
LWDLIQTQERLASNFGRRRCTLSLGCYRAQDICWPLAYRAVLLAEVSFTPLGMSMPLSGEQILTQHPKGREYGHLLKDYS
FVPLLVDARGEVLSLIPITNSASLGAVVTGDTELFIECSGTDMCAVLVAVNSLACDLSDMGMQIEPVQITYSFDTPWGRS
VTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMDCAVQVKQGTYVVEPAAYRNDFLHAVDLIEEVMLGRTLDRFS
PQVPCSFTVGRLSDLTLLTRKIKHLLVGFGYQEMIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLLS
AELKSAHALYPHRIFEIGKVAFCSPHGEHGTCTQQSLGFLNASQEASYNEVASLVSGLLYCLKLPYQVEEAQDPRFVLGR
QASICVHGSRVGIFGEIHPQVLSNWDIRMPCFAGELDVGALLP

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B5 domain

Homologues:

Organism=Homo sapiens, GI124028525, Length=620, Percent_Identity=23.0645161290323, Blast_Score=185, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17533403, Length=546, Percent_Identity=23.0769230769231, Blast_Score=146, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6323089, Length=647, Percent_Identity=21.483771251932, Blast_Score=131, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21355211, Length=617, Percent_Identity=22.3662884927066, Blast_Score=180, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYFB_TREPA (O83059)

Other databases:

- EMBL:   AE000520
- PIR:   D71377
- RefSeq:   NP_218455.1
- ProteinModelPortal:   O83059
- SMR:   O83059
- IntAct:   O83059
- GeneID:   2610762
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0015
- NMPDR:   fig|243276.1.peg.14
- TIGR:   TP_0015
- HOGENOM:   HBG497667
- OMA:   LLTRMCL
- ProtClustDB:   PRK09616
- BioCyc:   TPAL243276:TP_0015-MONOMER
- BRENDA:   6.1.1.20
- GO:   GO:0005737
- HAMAP:   MF_00284
- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR004531
- InterPro:   IPR022918
- Gene3D:   G3DSA:3.30.56.20
- SMART:   SM00873
- SMART:   SM00874
- TIGRFAMs:   TIGR00471

Pfam domain/function: PF03484 B5; SSF46955 Putativ_DNA_bind

EC number: =6.1.1.20

Molecular weight: Translated: 67191; Mature: 67060

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS51483 B5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKISIHEALFFELLGERCDDDTLERRLRSAKAELECSSFSVREDKEGGSLSPGGEVCDP
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCH
VQRTRGQASCVREGAFDARLLKIELNDTNRPDLWSTAGLARLLRVHAGGASRAAQYRAFL
HHHCCCHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
SDRCTVRDSYGRCVVVDARLQTIRPFIAGFVARGTGLSEVRLWDLIQTQERLASNFGRRR
HCCCEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEE
CTLSLGCYRAQDICWPLAYRAVLLAEVSFTPLGMSMPLSGEQILTQHPKGREYGHLLKDY
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCC
SFVPLLVDARGEVLSLIPITNSASLGAVVTGDTELFIECSGTDMCAVLVAVNSLACDLSD
CCCEEEEECCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHCCHHH
MGMQIEPVQITYSFDTPWGRSVTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMD
CCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
CAVQVKQGTYVVEPAAYRNDFLHAVDLIEEVMLGRTLDRFSPQVPCSFTVGRLSDLTLLT
CEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCCHHHHHHHH
RKIKHLLVGFGYQEMIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLL
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
SAELKSAHALYPHRIFEIGKVAFCSPHGEHGTCTQQSLGFLNASQEASYNEVASLVSGLL
HHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH
YCLKLPYQVEEAQDPRFVLGRQASICVHGSRVGIFGEIHPQVLSNWDIRMPCFAGELDVG
HHHHCCCCCCCCCCCCEEECCCCEEEEECCEEEEEECCCHHHHCCCCEECCEECCCCCCC
ALLP
CCCC
>Mature Secondary Structure 
PKISIHEALFFELLGERCDDDTLERRLRSAKAELECSSFSVREDKEGGSLSPGGEVCDP
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCCCCCCH
VQRTRGQASCVREGAFDARLLKIELNDTNRPDLWSTAGLARLLRVHAGGASRAAQYRAFL
HHHCCCHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
SDRCTVRDSYGRCVVVDARLQTIRPFIAGFVARGTGLSEVRLWDLIQTQERLASNFGRRR
HCCCEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEE
CTLSLGCYRAQDICWPLAYRAVLLAEVSFTPLGMSMPLSGEQILTQHPKGREYGHLLKDY
EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHCC
SFVPLLVDARGEVLSLIPITNSASLGAVVTGDTELFIECSGTDMCAVLVAVNSLACDLSD
CCCEEEEECCCCEEEEEEECCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHCCHHH
MGMQIEPVQITYSFDTPWGRSVTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMD
CCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
CAVQVKQGTYVVEPAAYRNDFLHAVDLIEEVMLGRTLDRFSPQVPCSFTVGRLSDLTLLT
CEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCCHHHHHHHH
RKIKHLLVGFGYQEMIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLL
HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHH
SAELKSAHALYPHRIFEIGKVAFCSPHGEHGTCTQQSLGFLNASQEASYNEVASLVSGLL
HHHHHHHHCCCHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHH
YCLKLPYQVEEAQDPRFVLGRQASICVHGSRVGIFGEIHPQVLSNWDIRMPCFAGELDVG
HHHHCCCCCCCCCCCCEEECCCCEEEEECCEEEEEECCCHHHHCCCCEECCEECCCCCCC
ALLP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876