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The map label for this gene is atpF

Identifier: 188587438

GI number: 188587438

Start: 3082022

End: 3082510

Strand: Reverse

Name: atpF

Synonym: Nther_2848

Alternate gene names: 188587438

Gene position: 3082510-3082022 (Counterclockwise)

Preceding gene: 188587439

Following gene: 188587437

Centisome position: 97.38

GC content: 36.81

Gene sequence:

>489_bases
TTGGTAGATCCGAATTTAGTTACATTTGTGTTAACCATAGTAAATATTCTGGTCCTGTTTTATCTCTTGAAACGGTTTCT
CTTTAAGCCAATTGGGGAGTTTATGGAAAACAGGAAAAATGAAATTAAGCAGAATTTAGAAGATGCGGAAAAAGAAAGGC
AAGAGGCAGAAAAGCTAAAGGAACAGTATTATGAAAAACTTCGTGGTGCCAAATCCGAAGCTCAAGAAATTATTCAACAA
GCTCGCCAGCGGGAAGAGGAAATTATTAAAGAAGCGAAACAAGAAGCGAAACAAGAAGCAGATGATATGATTGCCCGCGC
TCGAGAAGAAATCAATCAAGAGCAAAAGAAAGCAATTGAATCACTTAGAAGCGAAGTATCCGACCTAACCATTCAAATAA
CTGAAAGAGTTCTTAATGACACCATTGACAAGGATCAACAGAAAAAACTTGTGCAAAAATATCTAAAAGAGGTAGGTAGG
GTATCATGA

Upstream 100 bases:

>100_bases
TGTTGCAGAGACAACTGGTATTTATGCCTTGGTTATTGCATTGTTACTTCTATTTGCTAATCCATTGATCGGTATGCTGT
AGAAAGGGGGTCGAAAGACC

Downstream 100 bases:

>100_bases
TAATACCAAAAAGATATGCCGAGGCTTTATTTCAATTAGCAAAAGAACGGGAAAAAATTAATGAGATAACTCAATCTTTT
AATCAATTGATTGAAAGGCT

Product: ATP synthase F0, B subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVDPNLVTFVLTIVNILVLFYLLKRFLFKPIGEFMENRKNEIKQNLEDAEKERQEAEKLKEQYYEKLRGAKSEAQEIIQQ
ARQREEEIIKEAKQEAKQEADDMIARAREEINQEQKKAIESLRSEVSDLTIQITERVLNDTIDKDQQKKLVQKYLKEVGR
VS

Sequences:

>Translated_162_residues
MVDPNLVTFVLTIVNILVLFYLLKRFLFKPIGEFMENRKNEIKQNLEDAEKERQEAEKLKEQYYEKLRGAKSEAQEIIQQ
ARQREEEIIKEAKQEAKQEADDMIARAREEINQEQKKAIESLRSEVSDLTIQITERVLNDTIDKDQQKKLVQKYLKEVGR
VS
>Mature_162_residues
MVDPNLVTFVLTIVNILVLFYLLKRFLFKPIGEFMENRKNEIKQNLEDAEKERQEAEKLKEQYYEKLRGAKSEAQEIIQQ
ARQREEEIIKEAKQEAKQEADDMIARAREEINQEQKKAIESLRSEVSDLTIQITERVLNDTIDKDQQKKLVQKYLKEVGR
VS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=155, Percent_Identity=33.5483870967742, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_NATTJ (B2A3G6)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001918983.1
- ProteinModelPortal:   B2A3G6
- SMR:   B2A3G6
- GeneID:   6316463
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_2848
- HOGENOM:   HBG617328
- OMA:   NPGLIFW
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19184; Mature: 19184

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDPNLVTFVLTIVNILVLFYLLKRFLFKPIGEFMENRKNEIKQNLEDAEKERQEAEKLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQYYEKLRGAKSEAQEIIQQARQREEEIIKEAKQEAKQEADDMIARAREEINQEQKKAIE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRSEVSDLTIQITERVLNDTIDKDQQKKLVQKYLKEVGRVS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MVDPNLVTFVLTIVNILVLFYLLKRFLFKPIGEFMENRKNEIKQNLEDAEKERQEAEKLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQYYEKLRGAKSEAQEIIQQARQREEEIIKEAKQEAKQEADDMIARAREEINQEQKKAIE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRSEVSDLTIQITERVLNDTIDKDQQKKLVQKYLKEVGRVS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA