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The map label for this gene is atpE

Identifier: 188587439

GI number: 188587439

Start: 3082529

End: 3082789

Strand: Reverse

Name: atpE

Synonym: Nther_2849

Alternate gene names: 188587439

Gene position: 3082789-3082529 (Counterclockwise)

Preceding gene: 188587440

Following gene: 188587438

Centisome position: 97.39

GC content: 45.21

Gene sequence:

>261_bases
ATGATTGATGGTCAATCTTTAGTACTAGCAGCTAGTGCAATCGGTGCTGGCCTGGCAATGATTGCTGGTATCGGTGCAGG
AATAGGACAGGGTTTTGCCGCTGGTAAAGGTGCTGAATCAGTTGGAAGACAACCTGATGCCCAGGGTGATATTATCAGGA
CCATGTTACTAGGTGCTGCTGTTGCAGAGACAACTGGTATTTATGCCTTGGTTATTGCATTGTTACTTCTATTTGCTAAT
CCATTGATCGGTATGCTGTAG

Upstream 100 bases:

>100_bases
TGCAAATCCCTTACTTGCCATAGTGTAAGTCAGGTCTGATTTTCAGGTTTTATTTTGTTTGTCTGATCAAAAGAAATTAT
TTGATAAGGAGGAATTTAAC

Downstream 100 bases:

>100_bases
AAAGGGGGTCGAAAGACCTTGGTAGATCCGAATTTAGTTACATTTGTGTTAACCATAGTAAATATTCTGGTCCTGTTTTA
TCTCTTGAAACGGTTTCTCT

Product: F0F1 ATP synthase subunit C

Products: ADP; phosphate

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MIDGQSLVLAASAIGAGLAMIAGIGAGIGQGFAAGKGAESVGRQPDAQGDIIRTMLLGAAVAETTGIYALVIALLLLFAN
PLIGML

Sequences:

>Translated_86_residues
MIDGQSLVLAASAIGAGLAMIAGIGAGIGQGFAAGKGAESVGRQPDAQGDIIRTMLLGAAVAETTGIYALVIALLLLFAN
PLIGML
>Mature_86_residues
MIDGQSLVLAASAIGAGLAMIAGIGAGIGQGFAAGKGAESVGRQPDAQGDIIRTMLLGAAVAETTGIYALVIALLLLFAN
PLIGML

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_NATTJ (B2A3G7)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001918984.1
- ProteinModelPortal:   B2A3G7
- SMR:   B2A3G7
- GeneID:   6316464
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_2849
- HOGENOM:   HBG753983
- OMA:   IGQGNAS
- ProtClustDB:   PRK13469
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.15

Molecular weight: Translated: 8380; Mature: 8380

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf154db4)-; HASH(0xeae355c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDGQSLVLAASAIGAGLAMIAGIGAGIGQGFAAGKGAESVGRQPDAQGDIIRTMLLGAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
VAETTGIYALVIALLLLFANPLIGML
HHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MIDGQSLVLAASAIGAGLAMIAGIGAGIGQGFAAGKGAESVGRQPDAQGDIIRTMLLGAA
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
VAETTGIYALVIALLLLFANPLIGML
HHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O

Specific reaction: ATP + H2O = ADP + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA