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The map label for this gene is hdrB [H]

Identifier: 188587262

GI number: 188587262

Start: 2868885

End: 2869715

Strand: Reverse

Name: hdrB [H]

Synonym: Nther_2664

Alternate gene names: 188587262

Gene position: 2869715-2868885 (Counterclockwise)

Preceding gene: 188587263

Following gene: 188587261

Centisome position: 90.65

GC content: 42.0

Gene sequence:

>831_bases
ATGTTAGGATACTATCCGGGTTGTACTGTCAGAGCTCAACAGGATGACGGTTTTGAACGAGAGTCCTTGGCTATTCTAAC
AGCATTAGGGGTAAAAGTGGAGGAATTAGCCGAATGGGAATGTTGTGGAGCAATTTATCCCTTAACAAGTGACGAATACA
TGCCATTACTGTCTTCAGTGAGAGCTCTGAAAAGAACACAGGAAGAAGACAGAGAAGGGCTGTTAACTCTTTGCAGTGCC
TGTTACCACGTATTAAAACGTGTTAATAATAGAATGAATCAAGATCAGGAAGCCAAAAAACGAGTCGAAAATTATTTGGA
AGATGAATACGACGGTTCAACAAAAGTGTATCACTTGATAGAAGTTCTAAGAGATTACGCCGGTTATGATGCCTTGAAAA
AACAGGTGGAAAAACCCCTGGAAGGGGAAAAGATAGCTTGTTATTACGGGTGCCTGCTGTTGCGCCCAGAATCTGAGCTG
GGGCTTTTAGATGCAGAAAACCCCCGGCTCATGGATGAAATTCTTGAATCCCTTGGTGCACAGGCCATTAAATATCCTTA
TCGCACAGATTGTTGTGGTTCCTATCATGTAGCCCAACAGGAAAATGTCAGTAACAGCGCTAGTCTCAAAATTATCCAAT
CGGCCAAGGAAGCTGGGGCGACAGAAATGGTAACAGCCTGTCCTCTATGTAAACACAACTTGGAATACTGTCAAAAAGAC
TTGGATGAAGAAGACAAGCTTCCGGTTAGTTATATAACAGCCCCAATATTGCGCGCTTTTGGCGGTTTAGAATATATTGA
AAATCAAAAAATTAACTTGGCAGCCAATTAA

Upstream 100 bases:

>100_bases
ATAGTAACGGTACAGTAACGGAATAGCTTTTGCGTAGCAAAAGCTAATAATAAGGAAAATCCTTTGGATATCTAAACTAT
GAAAACAGGGAGTTGGTAAT

Downstream 100 bases:

>100_bases
TAAAGCTAATTACTAAATTTGAACGGCCACTTCTAGATGTCTGGATATCTGGATAACTGGATAATGATTTGATAATGAAG
GGAGGCTTACAAGGGTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MLGYYPGCTVRAQQDDGFERESLAILTALGVKVEELAEWECCGAIYPLTSDEYMPLLSSVRALKRTQEEDREGLLTLCSA
CYHVLKRVNNRMNQDQEAKKRVENYLEDEYDGSTKVYHLIEVLRDYAGYDALKKQVEKPLEGEKIACYYGCLLLRPESEL
GLLDAENPRLMDEILESLGAQAIKYPYRTDCCGSYHVAQQENVSNSASLKIIQSAKEAGATEMVTACPLCKHNLEYCQKD
LDEEDKLPVSYITAPILRAFGGLEYIENQKINLAAN

Sequences:

>Translated_276_residues
MLGYYPGCTVRAQQDDGFERESLAILTALGVKVEELAEWECCGAIYPLTSDEYMPLLSSVRALKRTQEEDREGLLTLCSA
CYHVLKRVNNRMNQDQEAKKRVENYLEDEYDGSTKVYHLIEVLRDYAGYDALKKQVEKPLEGEKIACYYGCLLLRPESEL
GLLDAENPRLMDEILESLGAQAIKYPYRTDCCGSYHVAQQENVSNSASLKIIQSAKEAGATEMVTACPLCKHNLEYCQKD
LDEEDKLPVSYITAPILRAFGGLEYIENQKINLAAN
>Mature_276_residues
MLGYYPGCTVRAQQDDGFERESLAILTALGVKVEELAEWECCGAIYPLTSDEYMPLLSSVRALKRTQEEDREGLLTLCSA
CYHVLKRVNNRMNQDQEAKKRVENYLEDEYDGSTKVYHLIEVLRDYAGYDALKKQVEKPLEGEKIACYYGCLLLRPESEL
GLLDAENPRLMDEILESLGAQAIKYPYRTDCCGSYHVAQQENVSNSASLKIIQSAKEAGATEMVTACPLCKHNLEYCQKD
LDEEDKLPVSYITAPILRAFGGLEYIENQKINLAAN

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 31136; Mature: 31136

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYYPGCTVRAQQDDGFERESLAILTALGVKVEELAEWECCGAIYPLTSDEYMPLLSSV
CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RALKRTQEEDREGLLTLCSACYHVLKRVNNRMNQDQEAKKRVENYLEDEYDGSTKVYHLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
EVLRDYAGYDALKKQVEKPLEGEKIACYYGCLLLRPESELGLLDAENPRLMDEILESLGA
HHHHHHHCHHHHHHHHHCCCCCCEEEEEHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCH
QAIKYPYRTDCCGSYHVAQQENVSNSASLKIIQSAKEAGATEMVTACPLCKHNLEYCQKD
HHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
LDEEDKLPVSYITAPILRAFGGLEYIENQKINLAAN
CCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEEEECC
>Mature Secondary Structure
MLGYYPGCTVRAQQDDGFERESLAILTALGVKVEELAEWECCGAIYPLTSDEYMPLLSSV
CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RALKRTQEEDREGLLTLCSACYHVLKRVNNRMNQDQEAKKRVENYLEDEYDGSTKVYHLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
EVLRDYAGYDALKKQVEKPLEGEKIACYYGCLLLRPESELGLLDAENPRLMDEILESLGA
HHHHHHHCHHHHHHHHHCCCCCCEEEEEHEEEEECCCCCCCCCCCCCCHHHHHHHHHHCH
QAIKYPYRTDCCGSYHVAQQENVSNSASLKIIQSAKEAGATEMVTACPLCKHNLEYCQKD
HHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
LDEEDKLPVSYITAPILRAFGGLEYIENQKINLAAN
CCCCCCCCHHHHHHHHHHHHCCHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]