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The map label for this gene is hdrC2 [H]

Identifier: 188587261

GI number: 188587261

Start: 2868401

End: 2868790

Strand: Reverse

Name: hdrC2 [H]

Synonym: Nther_2663

Alternate gene names: 188587261

Gene position: 2868790-2868401 (Counterclockwise)

Preceding gene: 188587262

Following gene: 188587260

Centisome position: 90.63

GC content: 40.26

Gene sequence:

>390_bases
GTGCGATTTCCCACAAAGACAGCAAACAACCGTGAACATGAAGAGTTAATGGACATTACTCAAAAAAATGTTAAAGATTG
TTATCAGTGCATGAAATGTAGTGCGGGTTGCCCGTTAACCGAATATATGGATTATTATCCACATCAAATAATGTTGCGTG
CCAAAATGGGTTTGTATGATCAAGTTTTTAACAGTAAGACTTTATGGGTCTGTGCTTCATGTATGGCTTGTTCAAGCCGG
TGTCCTCGGGATTTAGAACCTGCTAAAATCATGGAAGGGTTCCGAGCCATGTTGCTGCGCGAGCGTGATCAGGGCAAAGT
AGAAATTTTAGACACTAAAGGAGTTCCAAGACAAGCTTTAATTGCTTCCATGAGGAAATTTAGACGATAA

Upstream 100 bases:

>100_bases
AATTAATAAAGCTAATTACTAAATTTGAACGGCCACTTCTAGATGTCTGGATATCTGGATAACTGGATAATGATTTGATA
ATGAAGGGAGGCTTACAAGG

Downstream 100 bases:

>100_bases
AGACAAGCTGCTATCAAGCTGCGAGTAGAGGAGGGAAACAATGAGAATAGGAGTATTCATCTGCTGGTGTGGCAGTAATA
TTAAAAATATGGTGGATGTT

Product: Heterodisulfide reductase subunit C-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRFPTKTANNREHEELMDITQKNVKDCYQCMKCSAGCPLTEYMDYYPHQIMLRAKMGLYDQVFNSKTLWVCASCMACSSR
CPRDLEPAKIMEGFRAMLLRERDQGKVEILDTKGVPRQALIASMRKFRR

Sequences:

>Translated_129_residues
MRFPTKTANNREHEELMDITQKNVKDCYQCMKCSAGCPLTEYMDYYPHQIMLRAKMGLYDQVFNSKTLWVCASCMACSSR
CPRDLEPAKIMEGFRAMLLRERDQGKVEILDTKGVPRQALIASMRKFRR
>Mature_129_residues
MRFPTKTANNREHEELMDITQKNVKDCYQCMKCSAGCPLTEYMDYYPHQIMLRAKMGLYDQVFNSKTLWVCASCMACSSR
CPRDLEPAKIMEGFRAMLLRERDQGKVEILDTKGVPRQALIASMRKFRR

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B) [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 15070; Mature: 15070

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
14.0 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
14.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPTKTANNREHEELMDITQKNVKDCYQCMKCSAGCPLTEYMDYYPHQIMLRAKMGLYD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHH
QVFNSKTLWVCASCMACSSRCPRDLEPAKIMEGFRAMLLRERDQGKVEILDTKGVPRQAL
HHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
IASMRKFRR
HHHHHHHCC
>Mature Secondary Structure
MRFPTKTANNREHEELMDITQKNVKDCYQCMKCSAGCPLTEYMDYYPHQIMLRAKMGLYD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHH
QVFNSKTLWVCASCMACSSRCPRDLEPAKIMEGFRAMLLRERDQGKVEILDTKGVPRQAL
HHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
IASMRKFRR
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]