Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 188587057

GI number: 188587057

Start: 2628016

End: 2629497

Strand: Reverse

Name: mcp4 [H]

Synonym: Nther_2449

Alternate gene names: 188587057

Gene position: 2629497-2628016 (Counterclockwise)

Preceding gene: 188587058

Following gene: 188587056

Centisome position: 83.07

GC content: 35.29

Gene sequence:

>1482_bases
ATGAATAATTTAGACAAGAAAGCTAATTTATTCACAGTGGTTTTGGTAGTTGTTTTTTCAACATTTTACATCATGGGACA
TGTGGCTTCATACTTTGAGGGTGATCGGAGTAATGAAGAAATAATTATATTAATTGGAGTAACATTAATAACTTTAGTTA
TAGTGGGTATCAGGTTTTTTTTAAATAGTAACGACTTATATATAAGATATATTGCCTTGATAGGAATTTTAGCTTTGTAT
GTAATTACAAATTATTTTGGCTTATACAGTATTACTTTTATGACCTTGTGTCCGGTATTATTAATAGCTGTTGTATATCA
AGATAGGAAGTATGCTTTAATTTCTGGTACTTTATCTGCAGTAATATTGATTTTCTATTACTTTTACAATCAATATAATA
CGCAAACATCGGCAGAATTAATAACTGCTATACTAACTATGGTAGCGTTTCTAATAGGAATATTTTTTGTCACTAAAATT
GCCAGCGAATCTAAAAGTGAACTTGACATAGCTGTTAAAAGCCAACAGGAAAAAACTGAAGACTTAACTAGGGTGGTAGA
AAAAATTGATAACACAAGCGATAGTGCCCAAGAAATTTCTCAAAAAGTTAATAGCTACATAAGTGATGTTTCAACTGCCA
TGGGTGAAGTGAGTTCTGGTATTGATGAGGTAGCCCAGGGAGCCCAAGAAAATGCTAGTACAATTAGCGAAACCAAAAAA
GCAGTTGAAGATATATCTAAGTCTGCTCAGAGTGTGGCGGAATCGTCGGAAACCATTGCCGATAAAAGTTCGACCGTAAG
ATCAAATGTAGAGACTTCTAAAAGCTATGCGGAAGAAACTTTTAACCAAATGCAGGTGGTTAACCAGGGAAGAGAAGCTA
CTTTAGAGAAAACTCAAAAAACTGTGGATTCAATTGATAAGGTTAGAGAATTTGTTGATAAGATTGATGAAATTTCCGAG
CAAACCAATCTATTATCACTGAATGCATCAATTGAAGCGGCCAGAGCCGGTGAAGATGGCAAAGGCTTTGGTGTGGTTGC
CGATGAAATCAGAAAACTGGCTGAACAATCAGCACAGGCCACTGACGAAATTAGAGAAATAACCAATGAAATTGTTCAAA
ACTCCCATGAGGCCAAAGAAGCCACTGAAAGTGCTGAAGAGCCAGTAAATAAGGCTTTGGATCTATCTCAAAGTGTTAAA
GAGAAAATGGAGGAAGTGGTTAATTCAATCCATGAACTAGATATAGAAATTCAGAGTGTGGCATCAAGTGCAGAGGAGCA
ATCGGCGTCAATAGAAGAAGTTGAAGCTTCTATGGACAATATTAGTTCAACTTTAGAGCAAACATCTTCAAATACCGAAG
AAATCAATGCATCTACCCAGGAACAGGCAAGTAATGTGGAAAACATTAAAGATGATATTCAAAATCTAGAAGCAGTCATA
TCAGATCTATCCCAGTTGTCAAAAAGTATGGATGTTAAGTGA

Upstream 100 bases:

>100_bases
GAAAAAGAAATTGTCGCTGAATTTAAGCGATGTGCGGGAACTCAGTTTGATCCAAAATTGGTTGAAATATTTCTAGAGCT
ATTGAGGGGGGGTAACATTA

Downstream 100 bases:

>100_bases
AAAGTAATTAAAAATTATATCTATTAACTAAAATTTAATTGAACTTGTGAAATTAATAAGTGTCTAAACTAGCAAACAGG
CTTCTATTTGATCAGAAGCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MNNLDKKANLFTVVLVVVFSTFYIMGHVASYFEGDRSNEEIIILIGVTLITLVIVGIRFFLNSNDLYIRYIALIGILALY
VITNYFGLYSITFMTLCPVLLIAVVYQDRKYALISGTLSAVILIFYYFYNQYNTQTSAELITAILTMVAFLIGIFFVTKI
ASESKSELDIAVKSQQEKTEDLTRVVEKIDNTSDSAQEISQKVNSYISDVSTAMGEVSSGIDEVAQGAQENASTISETKK
AVEDISKSAQSVAESSETIADKSSTVRSNVETSKSYAEETFNQMQVVNQGREATLEKTQKTVDSIDKVREFVDKIDEISE
QTNLLSLNASIEAARAGEDGKGFGVVADEIRKLAEQSAQATDEIREITNEIVQNSHEAKEATESAEEPVNKALDLSQSVK
EKMEEVVNSIHELDIEIQSVASSAEEQSASIEEVEASMDNISSTLEQTSSNTEEINASTQEQASNVENIKDDIQNLEAVI
SDLSQLSKSMDVK

Sequences:

>Translated_493_residues
MNNLDKKANLFTVVLVVVFSTFYIMGHVASYFEGDRSNEEIIILIGVTLITLVIVGIRFFLNSNDLYIRYIALIGILALY
VITNYFGLYSITFMTLCPVLLIAVVYQDRKYALISGTLSAVILIFYYFYNQYNTQTSAELITAILTMVAFLIGIFFVTKI
ASESKSELDIAVKSQQEKTEDLTRVVEKIDNTSDSAQEISQKVNSYISDVSTAMGEVSSGIDEVAQGAQENASTISETKK
AVEDISKSAQSVAESSETIADKSSTVRSNVETSKSYAEETFNQMQVVNQGREATLEKTQKTVDSIDKVREFVDKIDEISE
QTNLLSLNASIEAARAGEDGKGFGVVADEIRKLAEQSAQATDEIREITNEIVQNSHEAKEATESAEEPVNKALDLSQSVK
EKMEEVVNSIHELDIEIQSVASSAEEQSASIEEVEASMDNISSTLEQTSSNTEEINASTQEQASNVENIKDDIQNLEAVI
SDLSQLSKSMDVK
>Mature_493_residues
MNNLDKKANLFTVVLVVVFSTFYIMGHVASYFEGDRSNEEIIILIGVTLITLVIVGIRFFLNSNDLYIRYIALIGILALY
VITNYFGLYSITFMTLCPVLLIAVVYQDRKYALISGTLSAVILIFYYFYNQYNTQTSAELITAILTMVAFLIGIFFVTKI
ASESKSELDIAVKSQQEKTEDLTRVVEKIDNTSDSAQEISQKVNSYISDVSTAMGEVSSGIDEVAQGAQENASTISETKK
AVEDISKSAQSVAESSETIADKSSTVRSNVETSKSYAEETFNQMQVVNQGREATLEKTQKTVDSIDKVREFVDKIDEISE
QTNLLSLNASIEAARAGEDGKGFGVVADEIRKLAEQSAQATDEIREITNEIVQNSHEAKEATESAEEPVNKALDLSQSVK
EKMEEVVNSIHELDIEIQSVASSAEEQSASIEEVEASMDNISSTLEQTSSNTEEINASTQEQASNVENIKDDIQNLEAVI
SDLSQLSKSMDVK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=280, Percent_Identity=29.2857142857143, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI2367378, Length=268, Percent_Identity=28.3582089552239, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788195, Length=262, Percent_Identity=29.0076335877863, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=349, Percent_Identity=27.2206303724928, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787690, Length=280, Percent_Identity=27.8571428571429, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 54277; Mature: 54277

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLDKKANLFTVVLVVVFSTFYIMGHVASYFEGDRSNEEIIILIGVTLITLVIVGIRFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHH
LNSNDLYIRYIALIGILALYVITNYFGLYSITFMTLCPVLLIAVVYQDRKYALISGTLSA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VILIFYYFYNQYNTQTSAELITAILTMVAFLIGIFFVTKIASESKSELDIAVKSQQEKTE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DLTRVVEKIDNTSDSAQEISQKVNSYISDVSTAMGEVSSGIDEVAQGAQENASTISETKK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHH
AVEDISKSAQSVAESSETIADKSSTVRSNVETSKSYAEETFNQMQVVNQGREATLEKTQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TVDSIDKVREFVDKIDEISEQTNLLSLNASIEAARAGEDGKGFGVVADEIRKLAEQSAQA
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
TDEIREITNEIVQNSHEAKEATESAEEPVNKALDLSQSVKEKMEEVVNSIHELDIEIQSV
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSAEEQSASIEEVEASMDNISSTLEQTSSNTEEINASTQEQASNVENIKDDIQNLEAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SDLSQLSKSMDVK
HHHHHHHHHCCCC
>Mature Secondary Structure
MNNLDKKANLFTVVLVVVFSTFYIMGHVASYFEGDRSNEEIIILIGVTLITLVIVGIRFF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHH
LNSNDLYIRYIALIGILALYVITNYFGLYSITFMTLCPVLLIAVVYQDRKYALISGTLSA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VILIFYYFYNQYNTQTSAELITAILTMVAFLIGIFFVTKIASESKSELDIAVKSQQEKTE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
DLTRVVEKIDNTSDSAQEISQKVNSYISDVSTAMGEVSSGIDEVAQGAQENASTISETKK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHH
AVEDISKSAQSVAESSETIADKSSTVRSNVETSKSYAEETFNQMQVVNQGREATLEKTQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TVDSIDKVREFVDKIDEISEQTNLLSLNASIEAARAGEDGKGFGVVADEIRKLAEQSAQA
HHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
TDEIREITNEIVQNSHEAKEATESAEEPVNKALDLSQSVKEKMEEVVNSIHELDIEIQSV
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSAEEQSASIEEVEASMDNISSTLEQTSSNTEEINASTQEQASNVENIKDDIQNLEAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SDLSQLSKSMDVK
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]