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The map label for this gene is ybgA [H]

Identifier: 188586749

GI number: 188586749

Start: 2262313

End: 2263332

Strand: Reverse

Name: ybgA [H]

Synonym: Nther_2140

Alternate gene names: 188586749

Gene position: 2263332-2262313 (Counterclockwise)

Preceding gene: 188586751

Following gene: 188586747

Centisome position: 71.5

GC content: 36.76

Gene sequence:

>1020_bases
TTGAGTCAAGATAATAAGAACAGTTCAACAAAAAAACAGCAACTGGAGTCTCACAAGAAAGTGACTCCGCGTGTGCTTAT
CAGTAGATGTTTAGGATTTGCCCCTTGCAGATTTGATGGAAGCATGTTCCGAGAGAATTTGATTGATCAATTACAGGGCT
TTGTTAAGTTCGTACCGGTATGCCCTGAGGAAGAACTGGGTTTAGGAACACCCCGTAAGACATTGAGACTATATGAATCA
CGAGAGGGTCATGGCTTGTATCAACAAGACACGGGTTCAGATTTGACCCAGGAGATGAAAGACTTCGCTTATGATTATCT
CTCTACTGTAGATAACTTACAAGGAGCAATTCTTAAAACTAGATCTCCATCATGTGCTTTGAAAGATGCCAAAATTTATG
CTGAGAAAACCAGTAACATCACCTCTAAAAGAGGGGCTGGACTATTTAGTGAATGTTTATTAGAACAATGGCCCAACCTT
CCTGTTGAAGATGAAGGCCGGTTGAAAAATCGTATCATAAGAGAGAACTTCTTAACTAAAATCTTTAGCCTGGCAAGATT
TGCAGAGATTAAATCCAGTGAATTAGTCAAAGAATTAATTAAATTTCATGCTGACCATAAATTTTTATTTATGTCTTATA
ACGAAAGTGTTAAAAATGAGTTAGGTCGTCTTTTGGCAAATCAAGATAACTATTCTACTAAGGAACTATTTTCAGAATAT
GAAACTCTACTCTATAAGATGTTTCAGGGAGAAAATACTCCAGGTCGTAAAGTCAATGTACTCATGCATATAATGGGCTT
TTTCAAGGATGAAGCTAGTAGTGATGAAAAATCATTTCTGCTCGATACTATTGAAAAATATCGTGAAAATCAACTGCCAT
TATCTGTCCCAATAAATATATTTAGATCTTGGGCTATTAAATACGAGCAAAGCTATCTCTTGAGTCAGTATTTTTTTGCC
CCTTTTCCAGAAGAATTGATTAGTTTGGAGGACTCTGGCAAGTCTTCTAGACCCAAGTAG

Upstream 100 bases:

>100_bases
TACCAGCTATTAAAGGTTTTTTTTAATATAACTAGAAATAATTACTAGTAGTTATTGTTTTAAATAAACCTAAATTCAAG
TAATAAAGGGGGCTTATAAA

Downstream 100 bases:

>100_bases
CCACATATTGGTCAGGTTTGCCATTTCTCTTTAATGCATTAACTCCCATATACCTTACTTTCCCAAAAATTTGCCTCTCT
TGGAATGGTCGGTCGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF169; TKP [H]

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSQDNKNSSTKKQQLESHKKVTPRVLISRCLGFAPCRFDGSMFRENLIDQLQGFVKFVPVCPEEELGLGTPRKTLRLYES
REGHGLYQQDTGSDLTQEMKDFAYDYLSTVDNLQGAILKTRSPSCALKDAKIYAEKTSNITSKRGAGLFSECLLEQWPNL
PVEDEGRLKNRIIRENFLTKIFSLARFAEIKSSELVKELIKFHADHKFLFMSYNESVKNELGRLLANQDNYSTKELFSEY
ETLLYKMFQGENTPGRKVNVLMHIMGFFKDEASSDEKSFLLDTIEKYRENQLPLSVPINIFRSWAIKYEQSYLLSQYFFA
PFPEELISLEDSGKSSRPK

Sequences:

>Translated_339_residues
MSQDNKNSSTKKQQLESHKKVTPRVLISRCLGFAPCRFDGSMFRENLIDQLQGFVKFVPVCPEEELGLGTPRKTLRLYES
REGHGLYQQDTGSDLTQEMKDFAYDYLSTVDNLQGAILKTRSPSCALKDAKIYAEKTSNITSKRGAGLFSECLLEQWPNL
PVEDEGRLKNRIIRENFLTKIFSLARFAEIKSSELVKELIKFHADHKFLFMSYNESVKNELGRLLANQDNYSTKELFSEY
ETLLYKMFQGENTPGRKVNVLMHIMGFFKDEASSDEKSFLLDTIEKYRENQLPLSVPINIFRSWAIKYEQSYLLSQYFFA
PFPEELISLEDSGKSSRPK
>Mature_338_residues
SQDNKNSSTKKQQLESHKKVTPRVLISRCLGFAPCRFDGSMFRENLIDQLQGFVKFVPVCPEEELGLGTPRKTLRLYESR
EGHGLYQQDTGSDLTQEMKDFAYDYLSTVDNLQGAILKTRSPSCALKDAKIYAEKTSNITSKRGAGLFSECLLEQWPNLP
VEDEGRLKNRIIRENFLTKIFSLARFAEIKSSELVKELIKFHADHKFLFMSYNESVKNELGRLLANQDNYSTKELFSEYE
TLLYKMFQGENTPGRKVNVLMHIMGFFKDEASSDEKSFLLDTIEKYRENQLPLSVPINIFRSWAIKYEQSYLLSQYFFAP
FPEELISLEDSGKSSRPK

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786925, Length=158, Percent_Identity=25.3164556962025, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013560 [H]

Pfam domain/function: PF08349 DUF1722 [H]

EC number: NA

Molecular weight: Translated: 39144; Mature: 39013

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDNKNSSTKKQQLESHKKVTPRVLISRCLGFAPCRFDGSMFRENLIDQLQGFVKFVPV
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
CPEEELGLGTPRKTLRLYESREGHGLYQQDTGSDLTQEMKDFAYDYLSTVDNLQGAILKT
CCCHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC
RSPSCALKDAKIYAEKTSNITSKRGAGLFSECLLEQWPNLPVEDEGRLKNRIIRENFLTK
CCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
IFSLARFAEIKSSELVKELIKFHADHKFLFMSYNESVKNELGRLLANQDNYSTKELFSEY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHH
ETLLYKMFQGENTPGRKVNVLMHIMGFFKDEASSDEKSFLLDTIEKYRENQLPLSVPINI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEHHHHH
FRSWAIKYEQSYLLSQYFFAPFPEELISLEDSGKSSRPK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SQDNKNSSTKKQQLESHKKVTPRVLISRCLGFAPCRFDGSMFRENLIDQLQGFVKFVPV
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
CPEEELGLGTPRKTLRLYESREGHGLYQQDTGSDLTQEMKDFAYDYLSTVDNLQGAILKT
CCCHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC
RSPSCALKDAKIYAEKTSNITSKRGAGLFSECLLEQWPNLPVEDEGRLKNRIIRENFLTK
CCCCCCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
IFSLARFAEIKSSELVKELIKFHADHKFLFMSYNESVKNELGRLLANQDNYSTKELFSEY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHH
ETLLYKMFQGENTPGRKVNVLMHIMGFFKDEASSDEKSFLLDTIEKYRENQLPLSVPINI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEHHHHH
FRSWAIKYEQSYLLSQYFFAPFPEELISLEDSGKSSRPK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6325460; 8905232; 9278503; 8387990 [H]