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The map label for this gene is rpfG [H]

Identifier: 188586747

GI number: 188586747

Start: 2259351

End: 2260460

Strand: Reverse

Name: rpfG [H]

Synonym: Nther_2138

Alternate gene names: 188586747

Gene position: 2260460-2259351 (Counterclockwise)

Preceding gene: 188586749

Following gene: 188586746

Centisome position: 71.41

GC content: 34.41

Gene sequence:

>1110_bases
TTGAGAAGGGTACATGTAGAAGATATTGAAAATGGAATGGTATTAGCTAGACCCGTATACAGTAGCAATGGAACCAGACT
GTTACAAGAAGGGGCTACCTTAAAAGAGAAATACATACCTAAAATCAAAGAATTAGGATACAATGCTGTTTATATACAGG
ATGAGCTTTTAGAAGATGTAGAAGTTAACGATCTGATTAATGAAGAATTGAAACGTGAGGCAGTAGAAGAAATTAAAGAC
ACCTTTAAAAAAGTGGATAATAAAGTTTCCTTAGAAAATCAAGTTGATGATATAAAAAGTGTATTGAATAAAATAATGGA
AGATGTCTTAGATCGTAAAAATTCTATAGTGGATATTATTGACATGAAAATGTATAATGAATACTTATTTCATCATTCAG
TAAATGTGGCTATTTTATCAATGATTGTGGGAATGTCCATGGGATTTAATTCATATGATTTATACAAGCTGGGTTTAGGT
GCTCTTCTGCATGATGTCGGAAAACTGGAAATATCCAATGATATATTAAACAAGGAAGGGAAACTGACAGAAGAAGAATA
TGAACAGGTAAAAACCCATTCTCAACAAGGTTACGAAAAATTAAAAGACCAAGAACAAATCCCATCTACTGCTAAAATTG
TAATTTTGCAACATCATGAGAGATATAATGGGGAAGGGTATCCCAATGGAAAAGCAGGAGAAGATATCCACGTATTCAGT
CGCATAGTCAGTGTAGTTGATGTCTTTGATGCCTTGATATCTGATAGACCTTATAGAAAAGGAGTTGTTCCTTCAGAAGC
TATGGAGTATATTCTAGGAGGAGCGGGTTCGTTATTTGATAAACGAGTAGTAGGACACTTTTTCAAAAAAGTGGCTGCTT
TTCCTGTAGGTTCCGAAGTTGTTTTAAATGACGGAAGGCAAGGCTTAGTTATTGAAAACTTTGAAAGCTATAGCTTGCGC
CCTAGGGTAAGAATTATTAAGGAAAAGGGACAAGATATTCAGCCTTACGATATCGATTTGCGTGAAACTAAATATAACAA
AGTAACTATTGTAAAGGTTGCTGAAGGTGAAGCTGAACAATCTAATTTTAGTCAAGAAGCTACCGGATGA

Upstream 100 bases:

>100_bases
AATTAGCCCCGCTTACCGGGGCTTTTTAATTATCTAATAATTATAATGGTTTAACTATCTAGTCTAGCAATCAGATTAAG
TATCTGAAGGAGGTTTTGAT

Downstream 100 bases:

>100_bases
TGATAATTATTTTAGACCTGGAGTTTAGCCCTGTTAAGGCCAAACATCCAGGTTTTTTTATACTTTCTAGGCGAACAGGA
GTTTGCTATAATTGAGTAAG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRRVHVEDIENGMVLARPVYSSNGTRLLQEGATLKEKYIPKIKELGYNAVYIQDELLEDVEVNDLINEELKREAVEEIKD
TFKKVDNKVSLENQVDDIKSVLNKIMEDVLDRKNSIVDIIDMKMYNEYLFHHSVNVAILSMIVGMSMGFNSYDLYKLGLG
ALLHDVGKLEISNDILNKEGKLTEEEYEQVKTHSQQGYEKLKDQEQIPSTAKIVILQHHERYNGEGYPNGKAGEDIHVFS
RIVSVVDVFDALISDRPYRKGVVPSEAMEYILGGAGSLFDKRVVGHFFKKVAAFPVGSEVVLNDGRQGLVIENFESYSLR
PRVRIIKEKGQDIQPYDIDLRETKYNKVTIVKVAEGEAEQSNFSQEATG

Sequences:

>Translated_369_residues
MRRVHVEDIENGMVLARPVYSSNGTRLLQEGATLKEKYIPKIKELGYNAVYIQDELLEDVEVNDLINEELKREAVEEIKD
TFKKVDNKVSLENQVDDIKSVLNKIMEDVLDRKNSIVDIIDMKMYNEYLFHHSVNVAILSMIVGMSMGFNSYDLYKLGLG
ALLHDVGKLEISNDILNKEGKLTEEEYEQVKTHSQQGYEKLKDQEQIPSTAKIVILQHHERYNGEGYPNGKAGEDIHVFS
RIVSVVDVFDALISDRPYRKGVVPSEAMEYILGGAGSLFDKRVVGHFFKKVAAFPVGSEVVLNDGRQGLVIENFESYSLR
PRVRIIKEKGQDIQPYDIDLRETKYNKVTIVKVAEGEAEQSNFSQEATG
>Mature_369_residues
MRRVHVEDIENGMVLARPVYSSNGTRLLQEGATLKEKYIPKIKELGYNAVYIQDELLEDVEVNDLINEELKREAVEEIKD
TFKKVDNKVSLENQVDDIKSVLNKIMEDVLDRKNSIVDIIDMKMYNEYLFHHSVNVAILSMIVGMSMGFNSYDLYKLGLG
ALLHDVGKLEISNDILNKEGKLTEEEYEQVKTHSQQGYEKLKDQEQIPSTAKIVILQHHERYNGEGYPNGKAGEDIHVFS
RIVSVVDVFDALISDRPYRKGVVPSEAMEYILGGAGSLFDKRVVGHFFKKVAAFPVGSEVVLNDGRQGLVIENFESYSLR
PRVRIIKEKGQDIQPYDIDLRETKYNKVTIVKVAEGEAEQSNFSQEATG

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 41922; Mature: 41922

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVHVEDIENGMVLARPVYSSNGTRLLQEGATLKEKYIPKIKELGYNAVYIQDELLEDV
CCCCCHHHCCCCEEEEEEEECCCCCCHHHCCCHHHHHHCCHHHHCCCCEEEEEHHHHHHC
EVNDLINEELKREAVEEIKDTFKKVDNKVSLENQVDDIKSVLNKIMEDVLDRKNSIVDII
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
DMKMYNEYLFHHSVNVAILSMIVGMSMGFNSYDLYKLGLGALLHDVGKLEISNDILNKEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECHHHHCCCC
KLTEEEYEQVKTHSQQGYEKLKDQEQIPSTAKIVILQHHERYNGEGYPNGKAGEDIHVFS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH
RIVSVVDVFDALISDRPYRKGVVPSEAMEYILGGAGSLFDKRVVGHFFKKVAAFPVGSEV
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCE
VLNDGRQGLVIENFESYSLRPRVRIIKEKGQDIQPYDIDLRETKYNKVTIVKVAEGEAEQ
EECCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEEEEECCCCHH
SNFSQEATG
HCCCCCCCC
>Mature Secondary Structure
MRRVHVEDIENGMVLARPVYSSNGTRLLQEGATLKEKYIPKIKELGYNAVYIQDELLEDV
CCCCCHHHCCCCEEEEEEEECCCCCCHHHCCCHHHHHHCCHHHHCCCCEEEEEHHHHHHC
EVNDLINEELKREAVEEIKDTFKKVDNKVSLENQVDDIKSVLNKIMEDVLDRKNSIVDII
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHH
DMKMYNEYLFHHSVNVAILSMIVGMSMGFNSYDLYKLGLGALLHDVGKLEISNDILNKEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECHHHHCCCC
KLTEEEYEQVKTHSQQGYEKLKDQEQIPSTAKIVILQHHERYNGEGYPNGKAGEDIHVFS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHH
RIVSVVDVFDALISDRPYRKGVVPSEAMEYILGGAGSLFDKRVVGHFFKKVAAFPVGSEV
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCE
VLNDGRQGLVIENFESYSLRPRVRIIKEKGQDIQPYDIDLRETKYNKVTIVKVAEGEAEQ
EECCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCEEEEEEEECCCCHH
SNFSQEATG
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]