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The map label for this gene is whiA

Identifier: 188586631

GI number: 188586631

Start: 2132149

End: 2133114

Strand: Reverse

Name: whiA

Synonym: Nther_2021

Alternate gene names: 188586631

Gene position: 2133114-2132149 (Counterclockwise)

Preceding gene: 188586632

Following gene: 188586630

Centisome position: 67.39

GC content: 34.78

Gene sequence:

>966_bases
ATGTCCTTTGCTAAATCATGCAAAAATGAACTTTCAAGAATTGAAATTAATAGAGAATGCTGCGAAAGAGCTGAACTAGC
TGCTTTTATTCATATGAATGGTTCTTTAACAATAAAAGGAGACGTTACCCTTCATTTAACAACAGAAAATCCAGCTATTG
CTAGGCGTATATTCCGAGTTTTCAAGAGTAGATTTAAAAAAGAAATGCAGATATTAATGAGAAAAAAAATGCGTTTGCAG
AAAGGTAATAGTTACTCACTTATATTAACTGGAAAGAATACAGTCAGCCTTGTCCTATCTAATTTGGAAATTACCAAGGG
AAGTTTTGATTTAAATACCGGAATAACTCCAGAACTAGTAGCTAATAGATGCTGTAAGAGGGCTTATTTAAGAGGAGCTT
TTATGGCACGGGGTTCTATTGCGAACCCCGATGCCAGTTATCATATGGAGATGACTGCTGATTACGAAGAGTATTTGGAT
GATCTCATTAAAGTAATGCAGTATTTTGAGCTATCCCCAGGTAAACTTGCAAGAAAAAAGGAGTACGTGAGTTATTTAAA
GGATAGTGAGCAGATATGTGAGTTTCTGAATATTATTGGAGCTCACAAAACCCTCCTTGATTACGAAAACGTGAGGGTTA
TGAAAGGTATGAGAAATAAGATAAATCGTTTGGTGAACTGTGAAACAGCAAATCTTCAAAAAACTGTTGTAGCCTCTTTA
AGGCATATAAAAAATATACAAACAATAGATGAAAATCTTGGATTGACACAACTTCCCAAATCTCTACAAGAAGTGGCAAT
TAAAAGAGTTGAATACCCAGAAGCTAATTTAAAAGAATTAGGAGAGCTTTTAGAACCTCCAGTGGGCAAATCCGGGGTTA
ATCATCGCCTACGGAAACTAGAAAAAATTGCTGAACAGTTGCATCAAACTGGATATTACGATGAAAATAATGGATATTTA
CAATAA

Upstream 100 bases:

>100_bases
AATTGGTGGCTATAAATTTACTTATGAACCTGAGATCTTAAGGCATTTTACTGCCAGATTTGCTCCTGTAAAATAAATTA
AACACAGTTAGGTGATAAAA

Downstream 100 bases:

>100_bases
AATAGTTAATTTGGAATGAAATTTGCAAGAGGATTTTAAGCTTTAATGTAGAATATAGATAATACAGGAAACTAAGCAAA
GGGGTGTTATAGTAGATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSFAKSCKNELSRIEINRECCERAELAAFIHMNGSLTIKGDVTLHLTTENPAIARRIFRVFKSRFKKEMQILMRKKMRLQ
KGNSYSLILTGKNTVSLVLSNLEITKGSFDLNTGITPELVANRCCKRAYLRGAFMARGSIANPDASYHMEMTADYEEYLD
DLIKVMQYFELSPGKLARKKEYVSYLKDSEQICEFLNIIGAHKTLLDYENVRVMKGMRNKINRLVNCETANLQKTVVASL
RHIKNIQTIDENLGLTQLPKSLQEVAIKRVEYPEANLKELGELLEPPVGKSGVNHRLRKLEKIAEQLHQTGYYDENNGYL
Q

Sequences:

>Translated_321_residues
MSFAKSCKNELSRIEINRECCERAELAAFIHMNGSLTIKGDVTLHLTTENPAIARRIFRVFKSRFKKEMQILMRKKMRLQ
KGNSYSLILTGKNTVSLVLSNLEITKGSFDLNTGITPELVANRCCKRAYLRGAFMARGSIANPDASYHMEMTADYEEYLD
DLIKVMQYFELSPGKLARKKEYVSYLKDSEQICEFLNIIGAHKTLLDYENVRVMKGMRNKINRLVNCETANLQKTVVASL
RHIKNIQTIDENLGLTQLPKSLQEVAIKRVEYPEANLKELGELLEPPVGKSGVNHRLRKLEKIAEQLHQTGYYDENNGYL
Q
>Mature_320_residues
SFAKSCKNELSRIEINRECCERAELAAFIHMNGSLTIKGDVTLHLTTENPAIARRIFRVFKSRFKKEMQILMRKKMRLQK
GNSYSLILTGKNTVSLVLSNLEITKGSFDLNTGITPELVANRCCKRAYLRGAFMARGSIANPDASYHMEMTADYEEYLDD
LIKVMQYFELSPGKLARKKEYVSYLKDSEQICEFLNIIGAHKTLLDYENVRVMKGMRNKINRLVNCETANLQKTVVASLR
HIKNIQTIDENLGLTQLPKSLQEVAIKRVEYPEANLKELGELLEPPVGKSGVNHRLRKLEKIAEQLHQTGYYDENNGYLQ

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_NATTJ (B2A6Z7)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001918176.1
- GeneID:   6315876
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_2021
- HOGENOM:   HBG485718
- OMA:   LERKKGY
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 36760; Mature: 36629

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFAKSCKNELSRIEINRECCERAELAAFIHMNGSLTIKGDVTLHLTTENPAIARRIFRV
CCHHHHHHHHHHHHHHCHHHHHHHHHHEEEEECCEEEEEEEEEEEEECCCHHHHHHHHHH
FKSRFKKEMQILMRKKMRLQKGNSYSLILTGKNTVSLVLSNLEITKGSFDLNTGITPELV
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHCEEECCCCCCCCCCCHHHH
ANRCCKRAYLRGAFMARGSIANPDASYHMEMTADYEEYLDDLIKVMQYFELSPGKLARKK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHH
EYVSYLKDSEQICEFLNIIGAHKTLLDYENVRVMKGMRNKINRLVNCETANLQKTVVASL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RHIKNIQTIDENLGLTQLPKSLQEVAIKRVEYPEANLKELGELLEPPVGKSGVNHRLRKL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
EKIAEQLHQTGYYDENNGYLQ
HHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure 
SFAKSCKNELSRIEINRECCERAELAAFIHMNGSLTIKGDVTLHLTTENPAIARRIFRV
CHHHHHHHHHHHHHHCHHHHHHHHHHEEEEECCEEEEEEEEEEEEECCCHHHHHHHHHH
FKSRFKKEMQILMRKKMRLQKGNSYSLILTGKNTVSLVLSNLEITKGSFDLNTGITPELV
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHCEEECCCCCCCCCCCHHHH
ANRCCKRAYLRGAFMARGSIANPDASYHMEMTADYEEYLDDLIKVMQYFELSPGKLARKK
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHH
EYVSYLKDSEQICEFLNIIGAHKTLLDYENVRVMKGMRNKINRLVNCETANLQKTVVASL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RHIKNIQTIDENLGLTQLPKSLQEVAIKRVEYPEANLKELGELLEPPVGKSGVNHRLRKL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
EKIAEQLHQTGYYDENNGYLQ
HHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA