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The map label for this gene is cggR [H]

Identifier: 188586629

GI number: 188586629

Start: 2129349

End: 2130377

Strand: Reverse

Name: cggR [H]

Synonym: Nther_2019

Alternate gene names: 188586629

Gene position: 2130377-2129349 (Counterclockwise)

Preceding gene: 188586630

Following gene: 188586628

Centisome position: 67.3

GC content: 37.22

Gene sequence:

>1029_bases
ATGGAAAAAGAGTGGGACTTACTTCTCAAACTCACACCAGAGCTAACTGAAGTTGCAGAAAAAAGGTATAAAATTCTTGC
TAATATATCTTATTATCAACCTGTCGGTCGAAGAATTCTGTCTGAACACATGAATATAAAGGAACGTGAATTAAGAAATG
AAATTAAAATTTTAAAAGAAAAACAATTAGTTAGTGTAGAGAATTACGGAATGATTTTAACAGATCTAGGAAATTCTGTT
TTACAAGATAGTAGGGAATTTGTTAAAAATCTTTCGGGAATAGTTGAAATGGAAAAAAACTTGCAAAAATTACTGGGCTT
ACAGCAGGTTATTATAGTACCGGGAGATGCTAACAAAGACGAGACTGTCAAACAAGAGATGGGAGCCGTAGCTGCCAAGA
CTCTTTGGAAACTATTATCATCCGGCGATGTAGTTTCCGTAGCTGGAGGCACTACTCTAGCTGAACTGGCTAAAATGGCA
CCTCAAAAATCTAAAAGTCAAGATATTACTATTTTACCAGCTCGTGGCGGCTTGGGTGAACGAGTAGAAATTCAGGCAAA
CACAGTGGCGGCTAAACTTGCAGATAAATTTAATGGTAATTACCGCATGCTCCACGTTCCTGACGAAGTAGGAAAAGATT
CCTTGGATATGCTATTAAAGGAACCAAAAATCAAAGAAATCGTAACTAAAATCAAAAATGCAGACATACTTGTACATGGG
ATTGGAGTAGCTGAGGAAATGGCCGAAAGAAGGGGATTATCTCGTGAAAGGATTGAACGCCTCCTAAATCAGGGGGTAGT
TGGTGAAGCTTTTGGCTTTTATCTTGACAGATATGGCAGATTAGTCGAAAAAGTAAATACTGTAGGAATAAGTTTATATG
ATTTAGAAAATATTGATAATGTAATGGCCGTTTCGGGAGGCAATAAAAAGGCAGTAGCGATTTTAGCCATGTTGGAAACT
GGACTCTGTGATATTTTAGTTACAGACGAGGGTGCGGCTGAAAAAATTCAAGCTATAATGAATACTTAG

Upstream 100 bases:

>100_bases
AAAGAGGGAAAAGAAATTTTTTTTACCCGATACAGGTCATATATGACCCCACGGGACAAAAAACGACCATTGACGGCTAC
TCTGCAAAGGAGTTGTTAAC

Downstream 100 bases:

>100_bases
ACCTGAGTTGTTAAAGTATTTAGATAATCAGAGTAAGGAGGAATTATAATGAAAAAAACTGTTAAAGACGTGGATGTTAC
AGGTAAACGAGTATTTGTTA

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MEKEWDLLLKLTPELTEVAEKRYKILANISYYQPVGRRILSEHMNIKERELRNEIKILKEKQLVSVENYGMILTDLGNSV
LQDSREFVKNLSGIVEMEKNLQKLLGLQQVIIVPGDANKDETVKQEMGAVAAKTLWKLLSSGDVVSVAGGTTLAELAKMA
PQKSKSQDITILPARGGLGERVEIQANTVAAKLADKFNGNYRMLHVPDEVGKDSLDMLLKEPKIKEIVTKIKNADILVHG
IGVAEEMAERRGLSRERIERLLNQGVVGEAFGFYLDRYGRLVEKVNTVGISLYDLENIDNVMAVSGGNKKAVAILAMLET
GLCDILVTDEGAAEKIQAIMNT

Sequences:

>Translated_342_residues
MEKEWDLLLKLTPELTEVAEKRYKILANISYYQPVGRRILSEHMNIKERELRNEIKILKEKQLVSVENYGMILTDLGNSV
LQDSREFVKNLSGIVEMEKNLQKLLGLQQVIIVPGDANKDETVKQEMGAVAAKTLWKLLSSGDVVSVAGGTTLAELAKMA
PQKSKSQDITILPARGGLGERVEIQANTVAAKLADKFNGNYRMLHVPDEVGKDSLDMLLKEPKIKEIVTKIKNADILVHG
IGVAEEMAERRGLSRERIERLLNQGVVGEAFGFYLDRYGRLVEKVNTVGISLYDLENIDNVMAVSGGNKKAVAILAMLET
GLCDILVTDEGAAEKIQAIMNT
>Mature_342_residues
MEKEWDLLLKLTPELTEVAEKRYKILANISYYQPVGRRILSEHMNIKERELRNEIKILKEKQLVSVENYGMILTDLGNSV
LQDSREFVKNLSGIVEMEKNLQKLLGLQQVIIVPGDANKDETVKQEMGAVAAKTLWKLLSSGDVVSVAGGTTLAELAKMA
PQKSKSQDITILPARGGLGERVEIQANTVAAKLADKFNGNYRMLHVPDEVGKDSLDMLLKEPKIKEIVTKIKNADILVHG
IGVAEEMAERRGLSRERIERLLNQGVVGEAFGFYLDRYGRLVEKVNTVGISLYDLENIDNVMAVSGGNKKAVAILAMLET
GLCDILVTDEGAAEKIQAIMNT

Specific function: Unknown

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI87082414, Length=264, Percent_Identity=27.6515151515151, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787791, Length=260, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 37873; Mature: 37873

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEWDLLLKLTPELTEVAEKRYKILANISYYQPVGRRILSEHMNIKERELRNEIKILKE
CCCCHHHHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KQLVSVENYGMILTDLGNSVLQDSREFVKNLSGIVEMEKNLQKLLGLQQVIIVPGDANKD
HHHEEHHCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH
ETVKQEMGAVAAKTLWKLLSSGDVVSVAGGTTLAELAKMAPQKSKSQDITILPARGGLGE
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCC
RVEIQANTVAAKLADKFNGNYRMLHVPDEVGKDSLDMLLKEPKIKEIVTKIKNADILVHG
EEEEEHHHHHHHHHHHHCCCEEEEECCHHHCCHHHHHHHCCCCHHHHHHHHCCCCEEEEE
IGVAEEMAERRGLSRERIERLLNQGVVGEAFGFYLDRYGRLVEKVNTVGISLYDLENIDN
CCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC
VMAVSGGNKKAVAILAMLETGLCDILVTDEGAAEKIQAIMNT
EEEECCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MEKEWDLLLKLTPELTEVAEKRYKILANISYYQPVGRRILSEHMNIKERELRNEIKILKE
CCCCHHHHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
KQLVSVENYGMILTDLGNSVLQDSREFVKNLSGIVEMEKNLQKLLGLQQVIIVPGDANKD
HHHEEHHCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH
ETVKQEMGAVAAKTLWKLLSSGDVVSVAGGTTLAELAKMAPQKSKSQDITILPARGGLGE
HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCC
RVEIQANTVAAKLADKFNGNYRMLHVPDEVGKDSLDMLLKEPKIKEIVTKIKNADILVHG
EEEEEHHHHHHHHHHHHCCCEEEEECCHHHCCHHHHHHHCCCCHHHHHHHHCCCCEEEEE
IGVAEEMAERRGLSRERIERLLNQGVVGEAFGFYLDRYGRLVEKVNTVGISLYDLENIDN
CCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCC
VMAVSGGNKKAVAILAMLETGLCDILVTDEGAAEKIQAIMNT
EEEECCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1452037 [H]