Click here to switch to the map view.

The map label for this gene is gpmI [H]

Identifier: 188586626

GI number: 188586626

Start: 2125754

End: 2127301

Strand: Reverse

Name: gpmI [H]

Synonym: Nther_2016

Alternate gene names: 188586626

Gene position: 2127301-2125754 (Counterclockwise)

Preceding gene: 188586627

Following gene: 188586625

Centisome position: 67.2

GC content: 39.79

Gene sequence:

>1548_bases
ATGAAGGATAAGAGTGTAAAACGTCCATTAGTGTTAATAATAATGGATGGACTAGGTATTAGTGGAGAACATGAGGGAAA
CGCTTATTATCAAGCTGACACACCTTTTTTAGATAATATATTTAAAAAACACGGTATGACAACTTTAAGAGCAGATGGTT
TACATGTAGGACTTCCAGAAGGCCAGATGGGAAACAGTGAAGTTGGACATCTGAACTTGGGTGCAGGCCGGGTAGTGTAT
CAAGAGCTAACTCGTATTAACAAAGACATTGAAACCGGTCAAATTGCCAGTAATGAAGTATTAAATGCATTAGGTGATAA
AGTAAAGGCTCGTGATTCTTCTTTACACTTATGGGGCTTGCTATCCGATGGTGGAGTGCATAGCCATATAGAACACATAA
AAGCTCTCTTAAGGCTGGCCAAAGAGAAGGGAGTTACAAAGGTTTATTTGCATGCAGTTACCGATGGAAGAGATGTTCCT
CCAAAAGTGGCGAAAAAATACATATCCGAAATTGAAGATGAAATGAAACAATTAGGTGTGGGACAAATTGCCACTGTGAT
GGGTAGATATTATGCCATGGATAGGGATAAGAGATATGATAGAACAGAAAAAGCTTATAATTGCCTTGTCCATGGTAAAG
GGCATCAGGAAACTACAGCTGAGGATGCAGTTGAGCAAGCTTATGAACGCAAAGAAACCGATGAATTTATTACCCCAACT
AGAATAATTGATCCAAATCAAGACCCTGATTCCTTGGTTAAAGATGGTGATGGGGTACTATGTTTTAATTTCAGACCGGA
TAGAGCACGCCAACTGACATGGGCTTTTATTTTACCAGAGTTTGAGGAATTTGATCGTACTCCTGTTGACGTGAGTTATG
TTTGTATGACTCAGTATGACGCTGAATTATCACTACCTATTGCATATCCACCCCATGCCCCTAAGAATACCCTGGGTGAA
TACCTGGCTAATCATGGTAAAGAACAGTTGAGAATAGCTGAGACGGAAAAGTATGCTCATGTCACGTTTTTCTTTAATGG
AGGAATAGAAGAAGCCAATCAAAATGAAGAACGCATTTTGATTCCTTCTCCGAAAGTAAGTACTTATGATCAGCAGCCTG
AAATGAGTGCCGCTGAAGTAACTCACCGCATGGATTCCGAATTGAAGAAAAAGGATTATGATTTTATTTTATTAAATTAC
GCTAATCCTGATATGGTTGGTCATACTGGGGATTTAGATGCCGCTGTAAAAGCAGTAGCTACACTGGACCGTTGTTTAGG
AGAACTAGTGCCTAAAATACTTGAACAGGGCGGAATTGCTGTAATCACTTCCGACCACGGTAATGCTGAAAAAATGGTTG
ATACAGAGGAAAATTCTCCCCATACTGCACATACTAGTCATGTAATCCCCTTTGTCATAGTAGATAACGATAATAGGTAT
CCTCTGAGATCGGGAGGAAAGCTAGCCGATGTGGCACCAACAGTATTAGAGTTAATGGGACTACCATTGCCCCAAGAAAT
GTCGGGTAAATCATTAATAGATCATTAA

Upstream 100 bases:

>100_bases
ATGGACCAGGACAATATTAATGGGGCCCTTGTAGGAGGGAAAAGCTTAGTAGCAGAAACCTACTGTCAATTACTGGAGGT
AGCTAGGAGGTTCCCAGGTG

Downstream 100 bases:

>100_bases
AATAAATTCAAACTGGAGGGATATATAATGAGCATGATAGAAGAAATTTACGCTAGGGAAATATTTGATTCACGTGGTAA
TCCAACTGTAGAAGTTGAAC

Product: phosphoglyceromutase

Products: NA

Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MKDKSVKRPLVLIIMDGLGISGEHEGNAYYQADTPFLDNIFKKHGMTTLRADGLHVGLPEGQMGNSEVGHLNLGAGRVVY
QELTRINKDIETGQIASNEVLNALGDKVKARDSSLHLWGLLSDGGVHSHIEHIKALLRLAKEKGVTKVYLHAVTDGRDVP
PKVAKKYISEIEDEMKQLGVGQIATVMGRYYAMDRDKRYDRTEKAYNCLVHGKGHQETTAEDAVEQAYERKETDEFITPT
RIIDPNQDPDSLVKDGDGVLCFNFRPDRARQLTWAFILPEFEEFDRTPVDVSYVCMTQYDAELSLPIAYPPHAPKNTLGE
YLANHGKEQLRIAETEKYAHVTFFFNGGIEEANQNEERILIPSPKVSTYDQQPEMSAAEVTHRMDSELKKKDYDFILLNY
ANPDMVGHTGDLDAAVKAVATLDRCLGELVPKILEQGGIAVITSDHGNAEKMVDTEENSPHTAHTSHVIPFVIVDNDNRY
PLRSGGKLADVAPTVLELMGLPLPQEMSGKSLIDH

Sequences:

>Translated_515_residues
MKDKSVKRPLVLIIMDGLGISGEHEGNAYYQADTPFLDNIFKKHGMTTLRADGLHVGLPEGQMGNSEVGHLNLGAGRVVY
QELTRINKDIETGQIASNEVLNALGDKVKARDSSLHLWGLLSDGGVHSHIEHIKALLRLAKEKGVTKVYLHAVTDGRDVP
PKVAKKYISEIEDEMKQLGVGQIATVMGRYYAMDRDKRYDRTEKAYNCLVHGKGHQETTAEDAVEQAYERKETDEFITPT
RIIDPNQDPDSLVKDGDGVLCFNFRPDRARQLTWAFILPEFEEFDRTPVDVSYVCMTQYDAELSLPIAYPPHAPKNTLGE
YLANHGKEQLRIAETEKYAHVTFFFNGGIEEANQNEERILIPSPKVSTYDQQPEMSAAEVTHRMDSELKKKDYDFILLNY
ANPDMVGHTGDLDAAVKAVATLDRCLGELVPKILEQGGIAVITSDHGNAEKMVDTEENSPHTAHTSHVIPFVIVDNDNRY
PLRSGGKLADVAPTVLELMGLPLPQEMSGKSLIDH
>Mature_515_residues
MKDKSVKRPLVLIIMDGLGISGEHEGNAYYQADTPFLDNIFKKHGMTTLRADGLHVGLPEGQMGNSEVGHLNLGAGRVVY
QELTRINKDIETGQIASNEVLNALGDKVKARDSSLHLWGLLSDGGVHSHIEHIKALLRLAKEKGVTKVYLHAVTDGRDVP
PKVAKKYISEIEDEMKQLGVGQIATVMGRYYAMDRDKRYDRTEKAYNCLVHGKGHQETTAEDAVEQAYERKETDEFITPT
RIIDPNQDPDSLVKDGDGVLCFNFRPDRARQLTWAFILPEFEEFDRTPVDVSYVCMTQYDAELSLPIAYPPHAPKNTLGE
YLANHGKEQLRIAETEKYAHVTFFFNGGIEEANQNEERILIPSPKVSTYDQQPEMSAAEVTHRMDSELKKKDYDFILLNY
ANPDMVGHTGDLDAAVKAVATLDRCLGELVPKILEQGGIAVITSDHGNAEKMVDTEENSPHTAHTSHVIPFVIVDNDNRY
PLRSGGKLADVAPTVLELMGLPLPQEMSGKSLIDH

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0696

COG function: function code G; Phosphoglyceromutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]

Homologues:

Organism=Escherichia coli, GI1790041, Length=509, Percent_Identity=49.901768172888, Blast_Score=519, Evalue=1e-148,
Organism=Caenorhabditis elegans, GI32564249, Length=524, Percent_Identity=44.0839694656489, Blast_Score=428, Evalue=1e-120,
Organism=Caenorhabditis elegans, GI17507741, Length=524, Percent_Identity=44.0839694656489, Blast_Score=428, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR011258
- InterPro:   IPR006124
- InterPro:   IPR005995 [H]

Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 57338; Mature: 57338

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKSVKRPLVLIIMDGLGISGEHEGNAYYQADTPFLDNIFKKHGMTTLRADGLHVGLPE
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEECCEEEECCC
GQMGNSEVGHLNLGAGRVVYQELTRINKDIETGQIASNEVLNALGDKVKARDSSLHLWGL
CCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
LSDGGVHSHIEHIKALLRLAKEKGVTKVYLHAVTDGRDVPPKVAKKYISEIEDEMKQLGV
ECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
GQIATVMGRYYAMDRDKRYDRTEKAYNCLVHGKGHQETTAEDAVEQAYERKETDEFITPT
HHHHHHHHHHHHCCCCHHCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCCC
RIIDPNQDPDSLVKDGDGVLCFNFRPDRARQLTWAFILPEFEEFDRTPVDVSYVCMTQYD
EEECCCCCHHHHHHCCCCEEEEECCCCHHHEEEEEEECCCHHHHCCCCCCEEEEEEEECC
AELSLPIAYPPHAPKNTLGEYLANHGKEQLRIAETEKYAHVTFFFNGGIEEANQNEERIL
CEEEEEECCCCCCCHHHHHHHHHHCCHHHEEEEECCCEEEEEEEEECCCCCCCCCCCEEE
IPSPKVSTYDQQPEMSAAEVTHRMDSELKKKDYDFILLNYANPDMVGHTGDLDAAVKAVA
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
TLDRCLGELVPKILEQGGIAVITSDHGNAEKMVDTEENSPHTAHTSHVIPFVIVDNDNRY
HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCEECCCCCCCCCCCCCCEEEEEEECCCCC
PLRSGGKLADVAPTVLELMGLPLPQEMSGKSLIDH
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKDKSVKRPLVLIIMDGLGISGEHEGNAYYQADTPFLDNIFKKHGMTTLRADGLHVGLPE
CCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEECCEEEECCC
GQMGNSEVGHLNLGAGRVVYQELTRINKDIETGQIASNEVLNALGDKVKARDSSLHLWGL
CCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
LSDGGVHSHIEHIKALLRLAKEKGVTKVYLHAVTDGRDVPPKVAKKYISEIEDEMKQLGV
ECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
GQIATVMGRYYAMDRDKRYDRTEKAYNCLVHGKGHQETTAEDAVEQAYERKETDEFITPT
HHHHHHHHHHHHCCCCHHCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCHHCCCC
RIIDPNQDPDSLVKDGDGVLCFNFRPDRARQLTWAFILPEFEEFDRTPVDVSYVCMTQYD
EEECCCCCHHHHHHCCCCEEEEECCCCHHHEEEEEEECCCHHHHCCCCCCEEEEEEEECC
AELSLPIAYPPHAPKNTLGEYLANHGKEQLRIAETEKYAHVTFFFNGGIEEANQNEERIL
CEEEEEECCCCCCCHHHHHHHHHHCCHHHEEEEECCCEEEEEEEEECCCCCCCCCCCEEE
IPSPKVSTYDQQPEMSAAEVTHRMDSELKKKDYDFILLNYANPDMVGHTGDLDAAVKAVA
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
TLDRCLGELVPKILEQGGIAVITSDHGNAEKMVDTEENSPHTAHTSHVIPFVIVDNDNRY
HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCEECCCCCCCCCCCCCCEEEEEEECCCCC
PLRSGGKLADVAPTVLELMGLPLPQEMSGKSLIDH
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA