Click here to switch to the map view.

The map label for this gene is 188586490

Identifier: 188586490

GI number: 188586490

Start: 1963418

End: 1963960

Strand: Direct

Name: 188586490

Synonym: Nther_1875

Alternate gene names: NA

Gene position: 1963418-1963960 (Clockwise)

Preceding gene: 188586489

Following gene: 188586500

Centisome position: 62.02

GC content: 29.47

Gene sequence:

>543_bases
ATGACAATTATAAACTCAAATAGAGTCCTTATTTGGGAAGTAGCCGGAATTTTATTTGTAATAATAGTCGGGTCTTTTCT
TCATTTTCTTTATGAATTATTAGAATTACCTTTAGTTGGTATAATAAGTCCTGTCAATGAAAGTCTCTTCGAACATCTTA
AATTGGGATTTTGGTCAATCGTGTTTTTTAGTTTGATTCAATATATTTTTTTAAATGATCAAGTTAATAACTTTTTAGTT
GCAAAAGCAGTGGCAATTCTAATTCTACAATCTTTTATAATGTTATTTTTCTTTTCTTACACTGCTATCACCGAAGAACC
TATTGTTTTTCTTGATATCATGTCATATATTTTTGGTACTGTCCTGGCTTATTCTGTTAGTTATAAAACTTTGATTTCAA
GTGAATTAAGAGAGTTTTATTCTCTAATGGCTGGAAGTTTTATTATAATTCACGGCACATTATTGGCTTACTTTACCTAC
AACAGACCAGACCACTGGTTCTTTCACCCTTTGATTGAGCTAATGATTCATTTCATAATCTAA

Upstream 100 bases:

>100_bases
AGTACAAATAGGGTGCCATTTATGGCACCCTATTTTCTTATATTCACGCTCTTTATTGGACAAGATAATAAAAAGATCTT
TCAAAACGGAGAAATTCAAT

Downstream 100 bases:

>100_bases
GGCTGTATTAAGATGAATTTTGATAGCTATATAAAATTTTTTAGTATCAAAGGTTAATATAACATAGCTAAAATAAAAGG
ATTGAGTCCTATAGTTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MTIINSNRVLIWEVAGILFVIIVGSFLHFLYELLELPLVGIISPVNESLFEHLKLGFWSIVFFSLIQYIFLNDQVNNFLV
AKAVAILILQSFIMLFFFSYTAITEEPIVFLDIMSYIFGTVLAYSVSYKTLISSELREFYSLMAGSFIIIHGTLLAYFTY
NRPDHWFFHPLIELMIHFII

Sequences:

>Translated_180_residues
MTIINSNRVLIWEVAGILFVIIVGSFLHFLYELLELPLVGIISPVNESLFEHLKLGFWSIVFFSLIQYIFLNDQVNNFLV
AKAVAILILQSFIMLFFFSYTAITEEPIVFLDIMSYIFGTVLAYSVSYKTLISSELREFYSLMAGSFIIIHGTLLAYFTY
NRPDHWFFHPLIELMIHFII
>Mature_179_residues
TIINSNRVLIWEVAGILFVIIVGSFLHFLYELLELPLVGIISPVNESLFEHLKLGFWSIVFFSLIQYIFLNDQVNNFLVA
KAVAILILQSFIMLFFFSYTAITEEPIVFLDIMSYIFGTVLAYSVSYKTLISSELREFYSLMAGSFIIIHGTLLAYFTYN
RPDHWFFHPLIELMIHFII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20928; Mature: 20797

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIINSNRVLIWEVAGILFVIIVGSFLHFLYELLELPLVGIISPVNESLFEHLKLGFWSI
CEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VFFSLIQYIFLNDQVNNFLVAKAVAILILQSFIMLFFFSYTAITEEPIVFLDIMSYIFGT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLAYSVSYKTLISSELREFYSLMAGSFIIIHGTLLAYFTYNRPDHWFFHPLIELMIHFII
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TIINSNRVLIWEVAGILFVIIVGSFLHFLYELLELPLVGIISPVNESLFEHLKLGFWSI
EEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VFFSLIQYIFLNDQVNNFLVAKAVAILILQSFIMLFFFSYTAITEEPIVFLDIMSYIFGT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VLAYSVSYKTLISSELREFYSLMAGSFIIIHGTLLAYFTYNRPDHWFFHPLIELMIHFII
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA