| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is menC [H]
Identifier: 188586165
GI number: 188586165
Start: 1626413
End: 1627588
Strand: Reverse
Name: menC [H]
Synonym: Nther_1544
Alternate gene names: 188586165
Gene position: 1627588-1626413 (Counterclockwise)
Preceding gene: 188586168
Following gene: 188586164
Centisome position: 51.42
GC content: 33.84
Gene sequence:
>1176_bases ATGAAAGAACAAGCTATCATCGAAAAAGTAAGAATCATTGAAGTCAATATGCCTTTTACAAATCATATTCAGGTGGGAGA AAGCTCTAATAAACTTCGAAAATCATTAATCATTGAGTTACACTCAGAAGGTATTATTGGCTATGGAGAGTCTGCGCCTT ACGGCGAACCATTCTATTCAGGAGAGACCATTTCTACAGTAAAGCCTATCCTCAAAGAAAACATTTTACCTAAAATAGTA GGAAAAGAAATCAGTTCAATTGAACAATTAAATCAATTAATCAACACCCAGATAAAAGGTAATAACTTTGCCAAGGCCGG GGTAGAAACGGCCTATTGGGATTTAATAGCTAAGAAAAGAAATATACCATTAAAACAACTCATTCACGAAAAATTAATGG AAATCGGGGTGAATGACCCTTCTTTAAATAATACCAATTATATTTTAAGTGGTGCTGCAATGGGTATTCCCCCGGGAGAA AAAGAAGACAATTTAGTAGAACAAGTAAAAAGTGCTTTGGAAGAAGGTTATCAAAAAATTAAAATAAAAGTGTCTCCAGG ATTTGATATCAATGCCATAGAAAAAGTTTTGAAAGTTATACCTGATGATATAAATTTTTGGATGGATGCTAGCGCTTCAT ATAACATAAAAAATCATTTACCGATATTAAAACAAATTGACTCTTACAATATTGATTTTTTAGAACAGCCTTTAGCACAT GACGATATTTTAGAGCATAGCCAGTTAAGCCAAGAAGTGACTACTCCCATCTGTTTAGATGAATCTTTATATTCTGCAAA GATAGCGGAAAATTCTCTTGGTCTCGGTTTTAACCAAATTTGGAACATTAAAATCCAACGCATCGGTGGGCTATTAGAGG CGCTTAAGATTTATAAGTTAGCATCTGAAAATAACGTCAGTGTGTGGGGCGGTACTATGCCTGAAACTGGTATTGGAGCT ATTTTTATGTTAGCTCTTGGAACTTATTCAAACTTTACTTATCCTTCAGATGTTGCAGATAGCACGAAATGGTATGGTAA TAATAACGATCTAAAGGATTTAAAAATGACCGGGGAGGGGAAAATCTTCTACTCCGATGAGATAGGAATTGGTGAAATCA ATCATTATAATTATAGAAAATATGGACATTTAGTTCATGAAGTAAATGGGTATTAA
Upstream 100 bases:
>100_bases TCGTAGATATAATGAACAGGAGCTAATTAACTATCAATTACTTGGGTAAAATAAACATAATTTAAATAACTTTATAAATA GTAGTTGAAGGAGGAACAAT
Downstream 100 bases:
>100_bases GCCTTAATTTTTAATAACTCCCAAAAAACTGCCCTTCACACTTAGCCGTGAAGGGCTTCTTATTTTCTTTAGAGGGATAT AGCTCTTTTTAGAAAGAAAA
Product: Mandelate racemase/muconate lactonizing protein
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKEQAIIEKVRIIEVNMPFTNHIQVGESSNKLRKSLIIELHSEGIIGYGESAPYGEPFYSGETISTVKPILKENILPKIV GKEISSIEQLNQLINTQIKGNNFAKAGVETAYWDLIAKKRNIPLKQLIHEKLMEIGVNDPSLNNTNYILSGAAMGIPPGE KEDNLVEQVKSALEEGYQKIKIKVSPGFDINAIEKVLKVIPDDINFWMDASASYNIKNHLPILKQIDSYNIDFLEQPLAH DDILEHSQLSQEVTTPICLDESLYSAKIAENSLGLGFNQIWNIKIQRIGGLLEALKIYKLASENNVSVWGGTMPETGIGA IFMLALGTYSNFTYPSDVADSTKWYGNNNDLKDLKMTGEGKIFYSDEIGIGEINHYNYRKYGHLVHEVNGY
Sequences:
>Translated_391_residues MKEQAIIEKVRIIEVNMPFTNHIQVGESSNKLRKSLIIELHSEGIIGYGESAPYGEPFYSGETISTVKPILKENILPKIV GKEISSIEQLNQLINTQIKGNNFAKAGVETAYWDLIAKKRNIPLKQLIHEKLMEIGVNDPSLNNTNYILSGAAMGIPPGE KEDNLVEQVKSALEEGYQKIKIKVSPGFDINAIEKVLKVIPDDINFWMDASASYNIKNHLPILKQIDSYNIDFLEQPLAH DDILEHSQLSQEVTTPICLDESLYSAKIAENSLGLGFNQIWNIKIQRIGGLLEALKIYKLASENNVSVWGGTMPETGIGA IFMLALGTYSNFTYPSDVADSTKWYGNNNDLKDLKMTGEGKIFYSDEIGIGEINHYNYRKYGHLVHEVNGY >Mature_391_residues MKEQAIIEKVRIIEVNMPFTNHIQVGESSNKLRKSLIIELHSEGIIGYGESAPYGEPFYSGETISTVKPILKENILPKIV GKEISSIEQLNQLINTQIKGNNFAKAGVETAYWDLIAKKRNIPLKQLIHEKLMEIGVNDPSLNNTNYILSGAAMGIPPGE KEDNLVEQVKSALEEGYQKIKIKVSPGFDINAIEKVLKVIPDDINFWMDASASYNIKNHLPILKQIDSYNIDFLEQPLAH DDILEHSQLSQEVTTPICLDESLYSAKIAENSLGLGFNQIWNIKIQRIGGLLEALKIYKLASENNVSVWGGTMPETGIGA IFMLALGTYSNFTYPSDVADSTKWYGNNNDLKDLKMTGEGKIFYSDEIGIGEINHYNYRKYGHLVHEVNGY
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081876, Length=309, Percent_Identity=23.9482200647249, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 - InterPro: IPR010197 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 43750; Mature: 43750
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEQAIIEKVRIIEVNMPFTNHIQVGESSNKLRKSLIIELHSEGIIGYGESAPYGEPFYS CCCHHHHCEEEEEEEECCCCCCEEECCCHHHHHHHHHHEECCCCCEECCCCCCCCCCCCC GETISTVKPILKENILPKIVGKEISSIEQLNQLINTQIKGNNFAKAGVETAYWDLIAKKR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHC NIPLKQLIHEKLMEIGVNDPSLNNTNYILSGAAMGIPPGEKEDNLVEQVKSALEEGYQKI CCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCCCCCCCHHHHHHHHHHHHCCHHEE KIKVSPGFDINAIEKVLKVIPDDINFWMDASASYNIKNHLPILKQIDSYNIDFLEQPLAH EEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCCHHHHHCCCCCHHHHCCCCH DDILEHSQLSQEVTTPICLDESLYSAKIAENSLGLGFNQIWNIKIQRIGGLLEALKIYKL HHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHH ASENNVSVWGGTMPETGIGAIFMLALGTYSNFTYPSDVADSTKWYGNNNDLKDLKMTGEG CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC KIFYSDEIGIGEINHYNYRKYGHLVHEVNGY EEEEECCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKEQAIIEKVRIIEVNMPFTNHIQVGESSNKLRKSLIIELHSEGIIGYGESAPYGEPFYS CCCHHHHCEEEEEEEECCCCCCEEECCCHHHHHHHHHHEECCCCCEECCCCCCCCCCCCC GETISTVKPILKENILPKIVGKEISSIEQLNQLINTQIKGNNFAKAGVETAYWDLIAKKR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHC NIPLKQLIHEKLMEIGVNDPSLNNTNYILSGAAMGIPPGEKEDNLVEQVKSALEEGYQKI CCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCCCCCCCHHHHHHHHHHHHCCHHEE KIKVSPGFDINAIEKVLKVIPDDINFWMDASASYNIKNHLPILKQIDSYNIDFLEQPLAH EEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCCHHHHHCCCCCHHHHCCCCH DDILEHSQLSQEVTTPICLDESLYSAKIAENSLGLGFNQIWNIKIQRIGGLLEALKIYKL HHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHH ASENNVSVWGGTMPETGIGAIFMLALGTYSNFTYPSDVADSTKWYGNNNDLKDLKMTGEG CCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC KIFYSDEIGIGEINHYNYRKYGHLVHEVNGY EEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 10194342 [H]