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The map label for this gene is yifB [H]

Identifier: 188586003

GI number: 188586003

Start: 1446093

End: 1447652

Strand: Direct

Name: yifB [H]

Synonym: Nther_1377

Alternate gene names: 188586003

Gene position: 1446093-1447652 (Clockwise)

Preceding gene: 188586002

Following gene: 188586005

Centisome position: 45.68

GC content: 38.97

Gene sequence:

>1560_bases
GTGTATACTAAACTGACAAGTTGTATTTTGCATGGTATCGAAGGTAAACTCATAGGAGTAGAAGTTGATATTGCTAATGG
AATTCCCAATTTTGAGATTGTGGGACTAGCCAACACAGCTGTGAAAGAGGCTAAGGGTCGTGTCCGATCGGCAATAAAAA
ACAGTGGTCTAGATTTTCCTACAAAACGCATTACCATCAATCTAGCACCCAGTAATCTCCCCAAGGGCGGATCGCAACTT
GATCTGTCTATTGCTCTTAGTATTTTAACTGCTTGTGGCCAAGGGATAGATTACCACAGTTATAACTGTTTTAGCCGGGA
TGCTGTATATATTGGCGAATTATCCCTGGATGGAAAAGTTAGAAGGATTGACGGTGCCCTCCCCATGGCTATGTCTGTGT
TAGAAAGCGGCTACTCAAACTTAGTTTTACCGGCAGAAAATGCTAAAGAAGTATCAGTACTAGGAGATAAACTGAAAGTA
TTCCCTATTAATTCTATTGAGGAAGCTATAGCTGTTATCAATTGTAAAGGGGCGTCTAGTAAAAATATCACTATTGATAT
GGATTGCCATCAATTTTCATCAACCAAAAAAACATGGTTATCAAATTTTAATGATGTAAAAGGTCAAGAGCAAGCTAAAA
GAGCTTTAGAGATTGCTGTAGCAGGGATGCATAATATCTTGATGATAGGGCCACCAGGGACGGGCAAGTCAATGCTCGCC
AAGCGCATTCCTTCAATAATGCCAGGGCTTAATTTTGAAGAATCCTTAGAAGTTACTAAAATTTATAGTGCTTCAGGAAA
ATTAGATTACAATACTTTTAATGGTTTGATAGCTATTCCACCGGTAAGAACCCCTCACCACAGTATTACAGAAGCTGCTT
TGATTGGTGGAGGAAAGGTTCCTATCCCTGGTGAAATCAGCCTTGCCCACAGGGGTATTTTAGTTTTAGACGAATTATCA
GAATTTTCAGCGACAACATTAGATTTATTACGCCAACCCTTGGAAGATGATAGGGTAGTTATTTCTCGAGCGCATGGTAC
ATGTGAGTTTCCGTCCAAATTTATGCTAGTGGCAACCACCAATCCGTGCCCTTGTGGTTACTTTACTGTGCCGGGAAAGG
AATGTACTTGTACTCCTCGTCAATTAAAAACTCATCATGGAAAAATAACAGGAGCGTTATGGGATCGCATTGATATACAG
GTTGAAGTACCGTTAATTGAATATAATGAAATTATTTCTAATAATAACGGTGAGGATTCCCAAGATATACAGCAAAGGGT
TATATCAGCGCGTCTTAAACAACAGGAGAGATATGGCTACTCAATGATCACTAATTCACGTTTAAAAGTTAATGAAATAA
AAATACACTGTTCCATCGATAAACAAGGTCAAAATCTGCTAAATCAAATGTTTGACAAATTAGGGCTAAGTATTAGGGGA
TATAATAAAATCCTAAAGGTTGCAAGGACCATTGCTGATTTGCGTGGTGATAACCAAATTACCGCCTCAGATTTGGCTGA
AGCTAGTAGTTATCGCGGCTTAGATCGTAAATACCAGTAA

Upstream 100 bases:

>100_bases
GGTAAAATGTGAAATTAGTCACTTGAGGGATGCTTTTTGATAAGGCTGTATTAACAAGAAATATAAGGACTTTGATTAAA
ATTTAGGAGATGAGTGCCAG

Downstream 100 bases:

>100_bases
AAAAGACACCCATTATTGGGTGTCTTCATTTTTTTCCTGGGTTAAACTTTGAAATTGGAATAATAAATTACAAATTTGGT
CTAAGTCATAAACTAGTGTA

Product: Mg chelatase, subunit ChlI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MYTKLTSCILHGIEGKLIGVEVDIANGIPNFEIVGLANTAVKEAKGRVRSAIKNSGLDFPTKRITINLAPSNLPKGGSQL
DLSIALSILTACGQGIDYHSYNCFSRDAVYIGELSLDGKVRRIDGALPMAMSVLESGYSNLVLPAENAKEVSVLGDKLKV
FPINSIEEAIAVINCKGASSKNITIDMDCHQFSSTKKTWLSNFNDVKGQEQAKRALEIAVAGMHNILMIGPPGTGKSMLA
KRIPSIMPGLNFEESLEVTKIYSASGKLDYNTFNGLIAIPPVRTPHHSITEAALIGGGKVPIPGEISLAHRGILVLDELS
EFSATTLDLLRQPLEDDRVVISRAHGTCEFPSKFMLVATTNPCPCGYFTVPGKECTCTPRQLKTHHGKITGALWDRIDIQ
VEVPLIEYNEIISNNNGEDSQDIQQRVISARLKQQERYGYSMITNSRLKVNEIKIHCSIDKQGQNLLNQMFDKLGLSIRG
YNKILKVARTIADLRGDNQITASDLAEASSYRGLDRKYQ

Sequences:

>Translated_519_residues
MYTKLTSCILHGIEGKLIGVEVDIANGIPNFEIVGLANTAVKEAKGRVRSAIKNSGLDFPTKRITINLAPSNLPKGGSQL
DLSIALSILTACGQGIDYHSYNCFSRDAVYIGELSLDGKVRRIDGALPMAMSVLESGYSNLVLPAENAKEVSVLGDKLKV
FPINSIEEAIAVINCKGASSKNITIDMDCHQFSSTKKTWLSNFNDVKGQEQAKRALEIAVAGMHNILMIGPPGTGKSMLA
KRIPSIMPGLNFEESLEVTKIYSASGKLDYNTFNGLIAIPPVRTPHHSITEAALIGGGKVPIPGEISLAHRGILVLDELS
EFSATTLDLLRQPLEDDRVVISRAHGTCEFPSKFMLVATTNPCPCGYFTVPGKECTCTPRQLKTHHGKITGALWDRIDIQ
VEVPLIEYNEIISNNNGEDSQDIQQRVISARLKQQERYGYSMITNSRLKVNEIKIHCSIDKQGQNLLNQMFDKLGLSIRG
YNKILKVARTIADLRGDNQITASDLAEASSYRGLDRKYQ
>Mature_519_residues
MYTKLTSCILHGIEGKLIGVEVDIANGIPNFEIVGLANTAVKEAKGRVRSAIKNSGLDFPTKRITINLAPSNLPKGGSQL
DLSIALSILTACGQGIDYHSYNCFSRDAVYIGELSLDGKVRRIDGALPMAMSVLESGYSNLVLPAENAKEVSVLGDKLKV
FPINSIEEAIAVINCKGASSKNITIDMDCHQFSSTKKTWLSNFNDVKGQEQAKRALEIAVAGMHNILMIGPPGTGKSMLA
KRIPSIMPGLNFEESLEVTKIYSASGKLDYNTFNGLIAIPPVRTPHHSITEAALIGGGKVPIPGEISLAHRGILVLDELS
EFSATTLDLLRQPLEDDRVVISRAHGTCEFPSKFMLVATTNPCPCGYFTVPGKECTCTPRQLKTHHGKITGALWDRIDIQ
VEVPLIEYNEIISNNNGEDSQDIQQRVISARLKQQERYGYSMITNSRLKVNEIKIHCSIDKQGQNLLNQMFDKLGLSIRG
YNKILKVARTIADLRGDNQITASDLAEASSYRGLDRKYQ

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=507, Percent_Identity=39.4477317554241, Blast_Score=343, Evalue=2e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 56714; Mature: 56714

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTKLTSCILHGIEGKLIGVEVDIANGIPNFEIVGLANTAVKEAKGRVRSAIKNSGLDFP
CCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCC
TKRITINLAPSNLPKGGSQLDLSIALSILTACGQGIDYHSYNCFSRDAVYIGELSLDGKV
CEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCE
RRIDGALPMAMSVLESGYSNLVLPAENAKEVSVLGDKLKVFPINSIEEAIAVINCKGASS
EEECCCHHHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCHHHEEEEEEECCCCC
KNITIDMDCHQFSSTKKTWLSNFNDVKGQEQAKRALEIAVAGMHNILMIGPPGTGKSMLA
CCEEEEECHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCEEEECCCCCCHHHHH
KRIPSIMPGLNFEESLEVTKIYSASGKLDYNTFNGLIAIPPVRTPHHSITEAALIGGGKV
HHHHHHHCCCCCHHCCCEEEEEECCCCEEEECCCCEEEECCCCCCCCCHHHHHEECCCCC
PIPGEISLAHRGILVLDELSEFSATTLDLLRQPLEDDRVVISRAHGTCEFPSKFMLVATT
CCCCCEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEC
NPCPCGYFTVPGKECTCTPRQLKTHHGKITGALWDRIDIQVEVPLIEYNEIISNNNGEDS
CCCCCCEEECCCCCCCCCHHHHHHCCCEEEEEEECEEEEEEEEEEEEHHHHHCCCCCCCH
QDIQQRVISARLKQQERYGYSMITNSRLKVNEIKIHCSIDKQGQNLLNQMFDKLGLSIRG
HHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCEEEC
YNKILKVARTIADLRGDNQITASDLAEASSYRGLDRKYQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MYTKLTSCILHGIEGKLIGVEVDIANGIPNFEIVGLANTAVKEAKGRVRSAIKNSGLDFP
CCHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCC
TKRITINLAPSNLPKGGSQLDLSIALSILTACGQGIDYHSYNCFSRDAVYIGELSLDGKV
CEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCE
RRIDGALPMAMSVLESGYSNLVLPAENAKEVSVLGDKLKVFPINSIEEAIAVINCKGASS
EEECCCHHHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEEECCCHHHEEEEEEECCCCC
KNITIDMDCHQFSSTKKTWLSNFNDVKGQEQAKRALEIAVAGMHNILMIGPPGTGKSMLA
CCEEEEECHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCEEEECCCCCCHHHHH
KRIPSIMPGLNFEESLEVTKIYSASGKLDYNTFNGLIAIPPVRTPHHSITEAALIGGGKV
HHHHHHHCCCCCHHCCCEEEEEECCCCEEEECCCCEEEECCCCCCCCCHHHHHEECCCCC
PIPGEISLAHRGILVLDELSEFSATTLDLLRQPLEDDRVVISRAHGTCEFPSKFMLVATT
CCCCCEECCCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEEC
NPCPCGYFTVPGKECTCTPRQLKTHHGKITGALWDRIDIQVEVPLIEYNEIISNNNGEDS
CCCCCCEEECCCCCCCCCHHHHHHCCCEEEEEEECEEEEEEEEEEEEHHHHHCCCCCCCH
QDIQQRVISARLKQQERYGYSMITNSRLKVNEIKIHCSIDKQGQNLLNQMFDKLGLSIRG
HHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCEEEC
YNKILKVARTIADLRGDNQITASDLAEASSYRGLDRKYQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]