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The map label for this gene is yraN [C]

Identifier: 188586002

GI number: 188586002

Start: 1445673

End: 1446032

Strand: Direct

Name: yraN [C]

Synonym: Nther_1376

Alternate gene names: 188586002

Gene position: 1445673-1446032 (Clockwise)

Preceding gene: 188586001

Following gene: 188586003

Centisome position: 45.67

GC content: 30.83

Gene sequence:

>360_bases
GTGAACAATAAATCCAAGGGAAGAACTGCCGAAAAGATTGCAAGAATCTTTCTATTAAGTAAAGGCTATCAAATTATTTT
CCAAAATTATAGATTTTCTCGGTTAGGAGAAATAGATTTAATATGTTGTTTTGACAATATCCTTATATTTGTAGAAGTTA
AGAGCAGATCATCTCTTTTATGGGGACAACCAGAAGAAGCGGTTGGTTATGAGAAACAAGGCCAGCTGAAAAAGTTGGCA
AATATTTTTTTGTACGAATTTAACGAATTTACTGAATACCAAATCAGATTTGATGTGATTGCTATTTTAAATAATAATAA
GGTAAAATGTGAAATTAGTCACTTGAGGGATGCTTTTTGA

Upstream 100 bases:

>100_bases
AATTATTGATAATCAGAAAAATCAACAGTTGGAGCTATTTTAGGGAATTATTATGATTGTGATTAAGTATTAATTAAAAT
GAAAAGAGGCACACAAGCAG

Downstream 100 bases:

>100_bases
TAAGGCTGTATTAACAAGAAATATAAGGACTTTGATTAAAATTTAGGAGATGAGTGCCAGGTGTATACTAAACTGACAAG
TTGTATTTTGCATGGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNNKSKGRTAEKIARIFLLSKGYQIIFQNYRFSRLGEIDLICCFDNILIFVEVKSRSSLLWGQPEEAVGYEKQGQLKKLA
NIFLYEFNEFTEYQIRFDVIAILNNNKVKCEISHLRDAF

Sequences:

>Translated_119_residues
MNNKSKGRTAEKIARIFLLSKGYQIIFQNYRFSRLGEIDLICCFDNILIFVEVKSRSSLLWGQPEEAVGYEKQGQLKKLA
NIFLYEFNEFTEYQIRFDVIAILNNNKVKCEISHLRDAF
>Mature_119_residues
MNNKSKGRTAEKIARIFLLSKGYQIIFQNYRFSRLGEIDLICCFDNILIFVEVKSRSSLLWGQPEEAVGYEKQGQLKKLA
NIFLYEFNEFTEYQIRFDVIAILNNNKVKCEISHLRDAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1376_NATTJ (B2A2P1)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001917547.1
- ProteinModelPortal:   B2A2P1
- GeneID:   6315689
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_1376
- HOGENOM:   HBG710155
- OMA:   YERIAEC
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13994; Mature: 13994

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKSKGRTAEKIARIFLLSKGYQIIFQNYRFSRLGEIDLICCFDNILIFVEVKSRSSLL
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE
WGQPEEAVGYEKQGQLKKLANIFLYEFNEFTEYQIRFDVIAILNNNKVKCEISHLRDAF
CCCCHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEEEEEEEEEECCEEEEEHHCCCCCC
>Mature Secondary Structure
MNNKSKGRTAEKIARIFLLSKGYQIIFQNYRFSRLGEIDLICCFDNILIFVEVKSRSSLL
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCEE
WGQPEEAVGYEKQGQLKKLANIFLYEFNEFTEYQIRFDVIAILNNNKVKCEISHLRDAF
CCCCHHHCCCCCCCHHHHHHHHHEEECCCCCEEEEEEEEEEEEECCEEEEEHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA