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The map label for this gene is ylmC [H]

Identifier: 188585938

GI number: 188585938

Start: 1385785

End: 1386060

Strand: Direct

Name: ylmC [H]

Synonym: Nther_1312

Alternate gene names: 188585938

Gene position: 1385785-1386060 (Clockwise)

Preceding gene: 188585937

Following gene: 188585939

Centisome position: 43.78

GC content: 39.49

Gene sequence:

>276_bases
GTGATTAAGGCTTCGGAATTAAGAAGAAGGGAAGTTGTCAGCGTGGATGATGGTAAAAGGCTAGGATTTGTAAGTGACTT
AGAACTTGATCCTAGGGAAGGGTGTATTAACGCTATTATAGTTCCTGGTCCAGGTAAATTTTTTGGACTTCTAGGCGGAG
AAAGAGATTATGTAATACCCTGGGATAAGATTGTTAAACTTGGTTCAGATGTTATCCTAGTTGAAGTACCAGGAATGAAT
AGGAAAGTCCAAAGAACTCACAAAAGTACACGCTAG

Upstream 100 bases:

>100_bases
AGGTCGAATTAAATTCCCTCCTCCAGGAGGGAATTTTTATTATAATAATTTAGGAAAAAAACCTTTCTGCTCATCATATG
ATGAATCAGGGGGTATTAAT

Downstream 100 bases:

>100_bases
ATCTGATTTAGGATACCTGTTATTGTTTAGAGTATATGATATAATATTTTTTAGTTAATAAATTTTAAATACACTGCAGC
GGAGGAATTATGTTATGTTT

Product: sporulation protein, YlmC/YmxH family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MIKASELRRREVVSVDDGKRLGFVSDLELDPREGCINAIIVPGPGKFFGLLGGERDYVIPWDKIVKLGSDVILVEVPGMN
RKVQRTHKSTR

Sequences:

>Translated_91_residues
MIKASELRRREVVSVDDGKRLGFVSDLELDPREGCINAIIVPGPGKFFGLLGGERDYVIPWDKIVKLGSDVILVEVPGMN
RKVQRTHKSTR
>Mature_91_residues
MIKASELRRREVVSVDDGKRLGFVSDLELDPREGCINAIIVPGPGKFFGLLGGERDYVIPWDKIVKLGSDVILVEVPGMN
RKVQRTHKSTR

Specific function: Unknown

COG id: COG1873

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ylmC/ymxH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007903
- InterPro:   IPR011033
- InterPro:   IPR014238 [H]

Pfam domain/function: PF05239 PRC [H]

EC number: NA

Molecular weight: Translated: 10175; Mature: 10175

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKASELRRREVVSVDDGKRLGFVSDLELDPREGCINAIIVPGPGKFFGLLGGERDYVIP
CCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEC
WDKIVKLGSDVILVEVPGMNRKVQRTHKSTR
HHHHHHCCCCEEEEEECCCCCHHHHHCCCCC
>Mature Secondary Structure
MIKASELRRREVVSVDDGKRLGFVSDLELDPREGCINAIIVPGPGKFFGLLGGERDYVIP
CCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCEEEC
WDKIVKLGSDVILVEVPGMNRKVQRTHKSTR
HHHHHHCCCCEEEEEECCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]