BacMap

Definition	Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession	NC_010718
Length	3,165,557

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The map label for this gene is cshA [H]

Identifier: 188585530

GI number: 188585530

Start: 952583

End: 954007

Strand: Reverse

Name: cshA [H]

Synonym: Nther_0902

Alternate gene names: 188585530

Gene position: 954007-952583 (Counterclockwise)

Preceding gene: 188585534

Following gene: 188585528

Centisome position: 30.14

GC content: 38.46

Gene sequence:

>1425_bases
ATGACTACTTTTAATGATTTAGGACTTAACGACGGTGTTATAAAGGCCATATCAGAAATGGGCTTTGAAGAAACCACACC
AATCCAAAGACAGGCTATTCCACAAGTAATGAATGGTCAAGATATTATTGGCCAGGCTCAAACTGGGACGGGGAAAACAG
CCGCCTTTGGGATTCCATATATTGAAAGGATTCAAGACCCTAATAATAAAGAAATCAAAGGGCTTGTAGTAACTCCCACT
AGAGAGTTGGCTATACAGGTGGCAGAAGAGATTAATAGATTAGGTCAGTATAATGGAATCACCGCTTTACCTATTTATGG
AGGCCAAAGTATAGGGCACCAAATCAAGGCTCTCAAAAAACGGCCTCAAATAATAGTCGGAACACCAGGTCGTTTAATCG
ATCACCTAAATCGAAAGACAATCAAATTAAACAATGTGAATATGGTTACATTAGACGAAGCCGATGAAATGTTGAATATG
GGTTTTATTGAAGATATCAAAACTATATTACAAAAAACCCCAAGTCACAAGCAGACTCTTATGTTTTCAGCCACCATGCC
GGGACCGATCAAAAGTTTAGCCGAACAATTTATGAATGACCCCGAAATAATTAGAACAAAAACAAAAGAAATTACCGTGC
CAAGTATTGAACAACAGTATGTCGAGGTTAAAGAAGGAGATAAATTCGATGTTTTTTGTCGCTTAGTAGACAGTCAGTCT
CCTGAAAAAGCTATTGTATTCGGAAGAACTAAACGAAGAGTTGATGAACTTTATCAGGCCTTGAAAAAACGAGGTTATTT
TGCTGAGGGGATTCATGGCGATATGCCCCAAACAAAACGAGACCATGTTATCAAAAATTTCCGTACTGGAGCTACAGAAC
TCCTTGTAGCAACAGACGTAGCTTCTAGAGGGTTAGATGTTACTGGAATCAGTCATATTTATAACTTTGATATTCCTCAA
GATGCTGACAGTTACGTCCATCGTATTGGCAGAACTGGCCGAGCAGGACAAAGCGGTGCAGCTGTCACTTTAGTAACACC
TAGAGAAAAAGGACATTTAAATCTAATTGAACAAAGTATTAAGAGGCAAATCCCTCGCAGACCAAAACCCTCGGTAGACG
AAGCTCTAGAAGGTAAACAAAAAATAGCCGTAGAAAAACTATTAAGCGAAGCAAAAGATAAGAATGCTAGACAATACCAT
AAATTAGCAGAAGAATTATTAGAAGAAAATGACTCAATTGAACTAGTAGCTGGTGCTTTAAAAAGTTTAACAGTAGAAAG
TGAAGGACCAAATATCAAACTTACCGAAGAGGCTCCGATCGTTAGAGGAAAATCCAAATCAAAAAAGGGTTCTGGTAAGT
CAGGTTCAGGTAAGCGCCAGGGACACAAGAGAAGCCATAAAAATTATCGTAAAAAAGGAAGATAA

Upstream 100 bases:

>100_bases
ATTGCAGAGCTTTACCTGAGTTTGGCTTTGCCAAATGTAAGTAAAGCTCTATTTTTTTGCGCACAATAAGAGAAAAGACA
ACGAAAGGATGTATTTTTTT

Downstream 100 bases:

>100_bases
AATTATATAAAAAGGAACAGGGACTAGTCCCCTGTTCCTTTTTTATATAAAATCCTTAATGTCATATTTTTTATGCCAAG
TATGTCTAATCAATCGACTG

Product: DEAD/DEAH box helicase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MTTFNDLGLNDGVIKAISEMGFEETTPIQRQAIPQVMNGQDIIGQAQTGTGKTAAFGIPYIERIQDPNNKEIKGLVVTPT
RELAIQVAEEINRLGQYNGITALPIYGGQSIGHQIKALKKRPQIIVGTPGRLIDHLNRKTIKLNNVNMVTLDEADEMLNM
GFIEDIKTILQKTPSHKQTLMFSATMPGPIKSLAEQFMNDPEIIRTKTKEITVPSIEQQYVEVKEGDKFDVFCRLVDSQS
PEKAIVFGRTKRRVDELYQALKKRGYFAEGIHGDMPQTKRDHVIKNFRTGATELLVATDVASRGLDVTGISHIYNFDIPQ
DADSYVHRIGRTGRAGQSGAAVTLVTPREKGHLNLIEQSIKRQIPRRPKPSVDEALEGKQKIAVEKLLSEAKDKNARQYH
KLAEELLEENDSIELVAGALKSLTVESEGPNIKLTEEAPIVRGKSKSKKGSGKSGSGKRQGHKRSHKNYRKKGR

Sequences:

>Translated_474_residues
MTTFNDLGLNDGVIKAISEMGFEETTPIQRQAIPQVMNGQDIIGQAQTGTGKTAAFGIPYIERIQDPNNKEIKGLVVTPT
RELAIQVAEEINRLGQYNGITALPIYGGQSIGHQIKALKKRPQIIVGTPGRLIDHLNRKTIKLNNVNMVTLDEADEMLNM
GFIEDIKTILQKTPSHKQTLMFSATMPGPIKSLAEQFMNDPEIIRTKTKEITVPSIEQQYVEVKEGDKFDVFCRLVDSQS
PEKAIVFGRTKRRVDELYQALKKRGYFAEGIHGDMPQTKRDHVIKNFRTGATELLVATDVASRGLDVTGISHIYNFDIPQ
DADSYVHRIGRTGRAGQSGAAVTLVTPREKGHLNLIEQSIKRQIPRRPKPSVDEALEGKQKIAVEKLLSEAKDKNARQYH
KLAEELLEENDSIELVAGALKSLTVESEGPNIKLTEEAPIVRGKSKSKKGSGKSGSGKRQGHKRSHKNYRKKGR
>Mature_473_residues
TTFNDLGLNDGVIKAISEMGFEETTPIQRQAIPQVMNGQDIIGQAQTGTGKTAAFGIPYIERIQDPNNKEIKGLVVTPTR
ELAIQVAEEINRLGQYNGITALPIYGGQSIGHQIKALKKRPQIIVGTPGRLIDHLNRKTIKLNNVNMVTLDEADEMLNMG
FIEDIKTILQKTPSHKQTLMFSATMPGPIKSLAEQFMNDPEIIRTKTKEITVPSIEQQYVEVKEGDKFDVFCRLVDSQSP
EKAIVFGRTKRRVDELYQALKKRGYFAEGIHGDMPQTKRDHVIKNFRTGATELLVATDVASRGLDVTGISHIYNFDIPQD
ADSYVHRIGRTGRAGQSGAAVTLVTPREKGHLNLIEQSIKRQIPRRPKPSVDEALEGKQKIAVEKLLSEAKDKNARQYHK
LAEELLEENDSIELVAGALKSLTVESEGPNIKLTEEAPIVRGKSKSKKGSGKSGSGKRQGHKRSHKNYRKKGR

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=372, Percent_Identity=38.9784946236559, Blast_Score=298, Evalue=8e-81,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=38.6058981233244, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI83700235, Length=372, Percent_Identity=38.4408602150538, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI224593278, Length=386, Percent_Identity=37.5647668393782, Blast_Score=262, Evalue=4e-70,
Organism=Homo sapiens, GI20149629, Length=413, Percent_Identity=35.3510895883777, Blast_Score=259, Evalue=3e-69,
Organism=Homo sapiens, GI222352149, Length=353, Percent_Identity=41.0764872521246, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=38.655462184874, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=38.655462184874, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI148613856, Length=371, Percent_Identity=38.544474393531, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI38201710, Length=371, Percent_Identity=38.544474393531, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI41327771, Length=395, Percent_Identity=34.4303797468354, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI31542656, Length=478, Percent_Identity=31.5899581589958, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI164664518, Length=375, Percent_Identity=33.3333333333333, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI301171475, Length=391, Percent_Identity=35.0383631713555, Blast_Score=241, Evalue=2e-63,
Organism=Homo sapiens, GI301171467, Length=391, Percent_Identity=35.0383631713555, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI87196351, Length=391, Percent_Identity=35.0383631713555, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI4758138, Length=352, Percent_Identity=39.4886363636364, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=37.0056497175141, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI55749865, Length=344, Percent_Identity=36.6279069767442, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI169881239, Length=391, Percent_Identity=34.5268542199489, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI13514809, Length=391, Percent_Identity=34.5268542199489, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI21040371, Length=347, Percent_Identity=34.5821325648415, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI13514831, Length=373, Percent_Identity=32.9758713136729, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=36.6946778711485, Blast_Score=229, Evalue=6e-60,
Organism=Homo sapiens, GI262118318, Length=366, Percent_Identity=34.6994535519126, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI4758112, Length=370, Percent_Identity=33.2432432432432, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI18375623, Length=370, Percent_Identity=33.2432432432432, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI13129006, Length=410, Percent_Identity=35.3658536585366, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=34.8901098901099, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI41327776, Length=413, Percent_Identity=33.4140435835351, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI262231852, Length=364, Percent_Identity=34.8901098901099, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI50659095, Length=430, Percent_Identity=32.5581395348837, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI13518015, Length=364, Percent_Identity=34.8901098901099, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=33.4277620396601, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=33.4277620396601, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI188035877, Length=351, Percent_Identity=35.3276353276353, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=33.2467532467532, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI6005743, Length=385, Percent_Identity=33.5064935064935, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI41327779, Length=378, Percent_Identity=32.5396825396825, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI62241022, Length=368, Percent_Identity=34.2391304347826, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=28.7878787878788, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI38327634, Length=368, Percent_Identity=33.4239130434783, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=32.258064516129, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI62241024, Length=346, Percent_Identity=34.393063583815, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=31.4666666666667, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI38569505, Length=375, Percent_Identity=31.4666666666667, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=32.3204419889503, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI17505907, Length=413, Percent_Identity=28.8135593220339, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI256773275, Length=402, Percent_Identity=28.3582089552239, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI9966805, Length=329, Percent_Identity=30.0911854103343, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI4826686, Length=361, Percent_Identity=27.9778393351801, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI154759257, Length=400, Percent_Identity=25.75, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI20336298, Length=244, Percent_Identity=31.5573770491803, Blast_Score=118, Evalue=1e-26,
Organism=Escherichia coli, GI87082221, Length=428, Percent_Identity=42.2897196261682, Blast_Score=349, Evalue=2e-97,
Organism=Escherichia coli, GI1787016, Length=381, Percent_Identity=38.8451443569554, Blast_Score=294, Evalue=1e-80,
Organism=Escherichia coli, GI1787605, Length=373, Percent_Identity=38.8739946380697, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1790214, Length=370, Percent_Identity=37.2972972972973, Blast_Score=263, Evalue=3e-71,
Organism=Escherichia coli, GI1788930, Length=391, Percent_Identity=36.5728900255754, Blast_Score=228, Evalue=6e-61,
Organism=Escherichia coli, GI48994977, Length=365, Percent_Identity=23.013698630137, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=38.4408602150538, Blast_Score=288, Evalue=5e-78,
Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=38.1720430107527, Blast_Score=287, Evalue=7e-78,
Organism=Caenorhabditis elegans, GI71987143, Length=372, Percent_Identity=36.8279569892473, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=37.1900826446281, Blast_Score=257, Evalue=9e-69,
Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=35.5263157894737, Blast_Score=244, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=33.1444759206799, Blast_Score=238, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=33.1444759206799, Blast_Score=238, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI17552114, Length=393, Percent_Identity=32.824427480916, Blast_Score=238, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=38.2022471910112, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71982858, Length=382, Percent_Identity=32.7225130890052, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=39.2215568862275, Blast_Score=231, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI71995718, Length=372, Percent_Identity=35.752688172043, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17537549, Length=379, Percent_Identity=35.0923482849604, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=36.6847826086957, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=36.6847826086957, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=36.6847826086957, Blast_Score=228, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI115532548, Length=377, Percent_Identity=34.7480106100796, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.9206349206349, Blast_Score=228, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI17552642, Length=388, Percent_Identity=36.5979381443299, Blast_Score=226, Evalue=3e-59,
Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=35.9459459459459, Blast_Score=225, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17507945, Length=336, Percent_Identity=38.3928571428571, Blast_Score=221, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI17510559, Length=405, Percent_Identity=32.8395061728395, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=34.8648648648649, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=32.112676056338, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=34.0540540540541, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17536099, Length=395, Percent_Identity=31.3924050632911, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17536101, Length=395, Percent_Identity=31.3924050632911, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17536103, Length=396, Percent_Identity=31.5656565656566, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=29.3604651162791, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17505370, Length=368, Percent_Identity=30.7065217391304, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=28.4009546539379, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI193208216, Length=422, Percent_Identity=29.1469194312796, Blast_Score=178, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=28.9972899728997, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17556951, Length=354, Percent_Identity=27.9661016949153, Blast_Score=161, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=29.8387096774194, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=27.1052631578947, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71990816, Length=357, Percent_Identity=29.9719887955182, Blast_Score=151, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=34.8039215686275, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI25148205, Length=343, Percent_Identity=27.4052478134111, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=24.8484848484848, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17507641, Length=200, Percent_Identity=36, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71987152, Length=108, Percent_Identity=37.962962962963, Blast_Score=99, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6320224, Length=374, Percent_Identity=39.3048128342246, Blast_Score=291, Evalue=1e-79,
Organism=Saccharomyces cerevisiae, GI6324217, Length=360, Percent_Identity=38.8888888888889, Blast_Score=268, Evalue=1e-72,
Organism=Saccharomyces cerevisiae, GI6320041, Length=374, Percent_Identity=36.6310160427808, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=40.6077348066298, Blast_Score=253, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=37.431693989071, Blast_Score=252, Evalue=7e-68,
Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=37.431693989071, Blast_Score=252, Evalue=7e-68,
Organism=Saccharomyces cerevisiae, GI6321856, Length=407, Percent_Identity=36.1179361179361, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6324778, Length=363, Percent_Identity=37.465564738292, Blast_Score=245, Evalue=8e-66,
Organism=Saccharomyces cerevisiae, GI6325138, Length=360, Percent_Identity=36.1111111111111, Blast_Score=234, Evalue=2e-62,
Organism=Saccharomyces cerevisiae, GI6322427, Length=381, Percent_Identity=32.5459317585302, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6324620, Length=365, Percent_Identity=33.6986301369863, Blast_Score=224, Evalue=3e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=380, Percent_Identity=35.5263157894737, Blast_Score=223, Evalue=6e-59,
Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=35.0923482849604, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6320119, Length=379, Percent_Identity=32.4538258575198, Blast_Score=213, Evalue=6e-56,
Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=35.8126721763085, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=33.1506849315069, Blast_Score=197, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6319714, Length=376, Percent_Identity=31.6489361702128, Blast_Score=194, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6321111, Length=350, Percent_Identity=31.1428571428571, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=31.1594202898551, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=31.1827956989247, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321267, Length=377, Percent_Identity=32.8912466843501, Blast_Score=171, Evalue=2e-43,
Organism=Saccharomyces cerevisiae, GI6319618, Length=410, Percent_Identity=28.2926829268293, Blast_Score=170, Evalue=5e-43,
Organism=Saccharomyces cerevisiae, GI6320173, Length=227, Percent_Identity=31.2775330396476, Blast_Score=146, Evalue=6e-36,
Organism=Saccharomyces cerevisiae, GI6324366, Length=351, Percent_Identity=26.4957264957265, Blast_Score=126, Evalue=8e-30,
Organism=Saccharomyces cerevisiae, GI6321374, Length=422, Percent_Identity=24.1706161137441, Blast_Score=101, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6322876, Length=234, Percent_Identity=30.3418803418803, Blast_Score=93, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=38.4408602150538, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24582080, Length=371, Percent_Identity=36.9272237196765, Blast_Score=258, Evalue=6e-69,
Organism=Drosophila melanogaster, GI24582078, Length=371, Percent_Identity=36.9272237196765, Blast_Score=258, Evalue=6e-69,
Organism=Drosophila melanogaster, GI17136248, Length=371, Percent_Identity=36.9272237196765, Blast_Score=258, Evalue=6e-69,
Organism=Drosophila melanogaster, GI24582075, Length=371, Percent_Identity=36.9272237196765, Blast_Score=258, Evalue=6e-69,
Organism=Drosophila melanogaster, GI24585582, Length=382, Percent_Identity=36.1256544502618, Blast_Score=254, Evalue=6e-68,
Organism=Drosophila melanogaster, GI24662330, Length=364, Percent_Identity=38.4615384615385, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI28574962, Length=366, Percent_Identity=39.0710382513661, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24644479, Length=357, Percent_Identity=38.655462184874, Blast_Score=249, Evalue=3e-66,
Organism=Drosophila melanogaster, GI24644483, Length=357, Percent_Identity=38.655462184874, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI281361218, Length=357, Percent_Identity=38.655462184874, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24644481, Length=357, Percent_Identity=38.655462184874, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=37.5350140056022, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI24644487, Length=357, Percent_Identity=38.655462184874, Blast_Score=248, Evalue=5e-66,
Organism=Drosophila melanogaster, GI45551833, Length=357, Percent_Identity=38.655462184874, Blast_Score=248, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24644485, Length=357, Percent_Identity=38.655462184874, Blast_Score=248, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24584399, Length=353, Percent_Identity=37.3937677053824, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=34.3163538873995, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=34.3163538873995, Blast_Score=245, Evalue=4e-65,
Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=37.2602739726027, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=36.1344537815126, Blast_Score=238, Evalue=5e-63,
Organism=Drosophila melanogaster, GI24584994, Length=394, Percent_Identity=34.2639593908629, Blast_Score=238, Evalue=8e-63,
Organism=Drosophila melanogaster, GI17985987, Length=393, Percent_Identity=35.3689567430025, Blast_Score=238, Evalue=1e-62,
Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=38.9041095890411, Blast_Score=235, Evalue=5e-62,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=32.7683615819209, Blast_Score=230, Evalue=1e-60,
Organism=Drosophila melanogaster, GI17977678, Length=361, Percent_Identity=34.6260387811634, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24581954, Length=371, Percent_Identity=32.8840970350404, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24581952, Length=371, Percent_Identity=32.8840970350404, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24581956, Length=371, Percent_Identity=32.8840970350404, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI17136814, Length=379, Percent_Identity=33.509234828496, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI281365720, Length=310, Percent_Identity=39.0322580645161, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI21355559, Length=418, Percent_Identity=33.0143540669856, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI28571808, Length=360, Percent_Identity=32.5, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28571809, Length=360, Percent_Identity=32.5, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=29.9465240641711, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI18859659, Length=440, Percent_Identity=29.3181818181818, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI28571338, Length=440, Percent_Identity=29.3181818181818, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=28.133704735376, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24666101, Length=348, Percent_Identity=31.8965517241379, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24643725, Length=383, Percent_Identity=26.6318537859008, Blast_Score=166, Evalue=5e-41,
Organism=Drosophila melanogaster, GI20130173, Length=324, Percent_Identity=29.0123456790123, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI19920478, Length=355, Percent_Identity=28.7323943661972, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24668515, Length=325, Percent_Identity=28.3076923076923, Blast_Score=136, Evalue=3e-32,
Organism=Drosophila melanogaster, GI17136666, Length=473, Percent_Identity=24.1014799154334, Blast_Score=125, Evalue=6e-29,
Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=27.7620396600567, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 52655; Mature: 52524

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFNDLGLNDGVIKAISEMGFEETTPIQRQAIPQVMNGQDIIGQAQTGTGKTAAFGIPY
CCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCH
IERIQDPNNKEIKGLVVTPTRELAIQVAEEINRLGQYNGITALPIYGGQSIGHQIKALKK
HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
RPQIIVGTPGRLIDHLNRKTIKLNNVNMVTLDEADEMLNMGFIEDIKTILQKTPSHKQTL
CCCEEEECCHHHHHHCCCCEEEECCCEEEEECCHHHHHHCHHHHHHHHHHHCCCCCCCEE
MFSATMPGPIKSLAEQFMNDPEIIRTKTKEITVPSIEQQYVEVKEGDKFDVFCRLVDSQS
EEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCC
PEKAIVFGRTKRRVDELYQALKKRGYFAEGIHGDMPQTKRDHVIKNFRTGATELLVATDV
CCCEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCHHHEEEEHHH
ASRGLDVTGISHIYNFDIPQDADSYVHRIGRTGRAGQSGAAVTLVTPREKGHLNLIEQSI
HHCCCCCEEHHHEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
KRQIPRRPKPSVDEALEGKQKIAVEKLLSEAKDKNARQYHKLAEELLEENDSIELVAGAL
HHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KSLTVESEGPNIKLTEEAPIVRGKSKSKKGSGKSGSGKRQGHKRSHKNYRKKGR
HHEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TTFNDLGLNDGVIKAISEMGFEETTPIQRQAIPQVMNGQDIIGQAQTGTGKTAAFGIPY
CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCEEECCCH
IERIQDPNNKEIKGLVVTPTRELAIQVAEEINRLGQYNGITALPIYGGQSIGHQIKALKK
HHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHH
RPQIIVGTPGRLIDHLNRKTIKLNNVNMVTLDEADEMLNMGFIEDIKTILQKTPSHKQTL
CCCEEEECCHHHHHHCCCCEEEECCCEEEEECCHHHHHHCHHHHHHHHHHHCCCCCCCEE
MFSATMPGPIKSLAEQFMNDPEIIRTKTKEITVPSIEQQYVEVKEGDKFDVFCRLVDSQS
EEECCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCC
PEKAIVFGRTKRRVDELYQALKKRGYFAEGIHGDMPQTKRDHVIKNFRTGATELLVATDV
CCCEEEECCHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCHHHEEEEHHH
ASRGLDVTGISHIYNFDIPQDADSYVHRIGRTGRAGQSGAAVTLVTPREKGHLNLIEQSI
HHCCCCCEEHHHEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
KRQIPRRPKPSVDEALEGKQKIAVEKLLSEAKDKNARQYHKLAEELLEENDSIELVAGAL
HHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KSLTVESEGPNIKLTEEAPIVRGKSKSKKGSGKSGSGKRQGHKRSHKNYRKKGR
HHEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA