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The map label for this gene is yadH [H]

Identifier: 188585534

GI number: 188585534

Start: 958730

End: 959491

Strand: Reverse

Name: yadH [H]

Synonym: Nther_0906

Alternate gene names: 188585534

Gene position: 959491-958730 (Counterclockwise)

Preceding gene: 188585535

Following gene: 188585530

Centisome position: 30.31

GC content: 34.51

Gene sequence:

>762_bases
ATGAGAAATATTATGGAAGTTATCTACATAATGATGATCAGACAAATTAAATTATTTTATAGATCCAAACCTAGAATGAT
AAGCTCCATTGCCCAACCCACTCTATTTTTAATTGCTCTAGGATTAGGTTTTGGCCCGGTATTCGAACAGGCTGGCGATA
TTGATTATATCCAATATCTAACTCCAGGAATCATTGGAATGACATTATTGTTTGGTTCAATGATGAATGGCATGTCTATC
ATTTGGGATAAAGAATTCGGATTCTTAAAAGAAACCCTGGTTGCTCCAGTACCCAGGCCGAGTTTGCTTATAGGTCGTTG
TCTTGGCGGCGCCATTACCAGCATGTTGCAGGGACTTATAGTATTTGGACTCAGCTATCTAATAATGGGATTTAGACTTA
ATAGCATTGTGGCCTTACCTTTATTCCTAGTTGTGATGTTATTGATAGCGTTATCATTTACTTTATTAGGAACAGTAATT
GCCACCAAAGTCGATGATATGCAGGCCTTTCCAACTGTCATGAACTTTTTAATTTTTCCTATGTTTTTTCTTTCAGGGGC
GATTTTCCCTATTGAAAATTTACCGAATTATGTGGCTACCATTACTAATCTCAATCCAATGACCTATGGAGTAAATTTAC
TTAGGAATACTATAAATTTAGATTACACAACTGCTAATTTTTTAGATACCATGGTAATATTAGCTTTAATAATACTATTA
ATAATGATTGGAAGTCCCATATTTAACAGGATAGAAACATAA

Upstream 100 bases:

>100_bases
GTTATGATTTAAGATATTAATTATAAATTAAAAATTAAATTAAAATAGTAATGAAGATATTATGGAACGATTGATTAGAT
AGGGATTGAGGAGGTATTGT

Downstream 100 bases:

>100_bases
TAAAAGCAAGCTGCCAACCTTCATAAAACCCAAAACTATTAGAGTATTTACCAAACCGATAACCGGGAATAACACCATGG
ATATCACAAGTCCAGAAATC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRNIMEVIYIMMIRQIKLFYRSKPRMISSIAQPTLFLIALGLGFGPVFEQAGDIDYIQYLTPGIIGMTLLFGSMMNGMSI
IWDKEFGFLKETLVAPVPRPSLLIGRCLGGAITSMLQGLIVFGLSYLIMGFRLNSIVALPLFLVVMLLIALSFTLLGTVI
ATKVDDMQAFPTVMNFLIFPMFFLSGAIFPIENLPNYVATITNLNPMTYGVNLLRNTINLDYTTANFLDTMVILALIILL
IMIGSPIFNRIET

Sequences:

>Translated_253_residues
MRNIMEVIYIMMIRQIKLFYRSKPRMISSIAQPTLFLIALGLGFGPVFEQAGDIDYIQYLTPGIIGMTLLFGSMMNGMSI
IWDKEFGFLKETLVAPVPRPSLLIGRCLGGAITSMLQGLIVFGLSYLIMGFRLNSIVALPLFLVVMLLIALSFTLLGTVI
ATKVDDMQAFPTVMNFLIFPMFFLSGAIFPIENLPNYVATITNLNPMTYGVNLLRNTINLDYTTANFLDTMVILALIILL
IMIGSPIFNRIET
>Mature_253_residues
MRNIMEVIYIMMIRQIKLFYRSKPRMISSIAQPTLFLIALGLGFGPVFEQAGDIDYIQYLTPGIIGMTLLFGSMMNGMSI
IWDKEFGFLKETLVAPVPRPSLLIGRCLGGAITSMLQGLIVFGLSYLIMGFRLNSIVALPLFLVVMLLIALSFTLLGTVI
ATKVDDMQAFPTVMNFLIFPMFFLSGAIFPIENLPNYVATITNLNPMTYGVNLLRNTINLDYTTANFLDTMVILALIILL
IMIGSPIFNRIET

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=183, Percent_Identity=28.4153005464481, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787010, Length=166, Percent_Identity=27.1084337349398, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28204; Mature: 28204

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCHHHHHCCC
>Mature Secondary Structure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HHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]