| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is yugO [H]
Identifier: 188585528
GI number: 188585528
Start: 950467
End: 951261
Strand: Reverse
Name: yugO [H]
Synonym: Nther_0900
Alternate gene names: 188585528
Gene position: 951261-950467 (Counterclockwise)
Preceding gene: 188585530
Following gene: 188585523
Centisome position: 30.05
GC content: 31.7
Gene sequence:
>795_bases ATGCCATTATATCTAGTAAAAAATGTTCTTAATCAAATATTGCAAATAAAAAACTTCAAGCTCGTTACTCTTGCAATCCT ATTTCTAGTCTTGAGTTCATATGTTTTGTATTTTATTGAGCCCGATACTTTTAGCACTCCCTTTGCTGGATTTTGGTTTG TCATGACCACTATTTCTCAACAGGGCTATGCAGATATTCTTCCAAATACTTTAGCAGGTAGGATATATACAATTATTCTG TTTATCATAGGAATAGGAATTTTTGGAGTTATAATAGCAAAATGGGTGGATGGCGTTATTCAATACCGGCAAGCCAAGGA GAGTGGTAATTTGAGTTATTTGGGTAAAAATCACATAGTTATGATTAATTGGTCTAAAAAAACTGAAAATGCCATAGATG AACTTTTAAAAAATCAAAACAAAAAAATTGTACTAATCGATGAATTACAAACAACTCCTATCCAGCATGAACAGGTTCAC TACATACAAGGAGCACCTACAGATAAAAACACTCTCACTAAGGCTAATATCTTGCAATCCAAAGCTATTAGTGTCTTTGC AAAAGATAATATAACTGATGAAATTTCCTTGGATGGTAAAACCCTGTTAATTGGCTTAACTATCCAGGAATTACTCAATG AAAATAAGAAGGATATTTATACTTCAGTAGAGGTGATCAATGAACAGCATTTATCCTCTTTCAAAAATCTCAGCAAAATA GATAAAATAATCCTATCCAATAAACCATTTTCAAACATTTTAACTCAATCTATCCTTGAAAATGCTAGTCCTTAA
Upstream 100 bases:
>100_bases AAATAGGAAGATAACCTACTATTATCCTTTTGTATTATTAACAAGTTAACTTCTAATAATAAACCATATCAATTACTAAA AATTAAACAGGTGGGAGTCC
Downstream 100 bases:
>100_bases TAAAATTCCATGCCTTTACCTCTTAATTTTTCTTTATCTGATATCCAAGCATATGCTAGCAAACAGGGAGTATTAACTTC AGTTGTCAAATAATGCACTT
Product: Ion transport 2 domain protein
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MPLYLVKNVLNQILQIKNFKLVTLAILFLVLSSYVLYFIEPDTFSTPFAGFWFVMTTISQQGYADILPNTLAGRIYTIIL FIIGIGIFGVIIAKWVDGVIQYRQAKESGNLSYLGKNHIVMINWSKKTENAIDELLKNQNKKIVLIDELQTTPIQHEQVH YIQGAPTDKNTLTKANILQSKAISVFAKDNITDEISLDGKTLLIGLTIQELLNENKKDIYTSVEVINEQHLSSFKNLSKI DKIILSNKPFSNILTQSILENASP
Sequences:
>Translated_264_residues MPLYLVKNVLNQILQIKNFKLVTLAILFLVLSSYVLYFIEPDTFSTPFAGFWFVMTTISQQGYADILPNTLAGRIYTIIL FIIGIGIFGVIIAKWVDGVIQYRQAKESGNLSYLGKNHIVMINWSKKTENAIDELLKNQNKKIVLIDELQTTPIQHEQVH YIQGAPTDKNTLTKANILQSKAISVFAKDNITDEISLDGKTLLIGLTIQELLNENKKDIYTSVEVINEQHLSSFKNLSKI DKIILSNKPFSNILTQSILENASP >Mature_263_residues PLYLVKNVLNQILQIKNFKLVTLAILFLVLSSYVLYFIEPDTFSTPFAGFWFVMTTISQQGYADILPNTLAGRIYTIILF IIGIGIFGVIIAKWVDGVIQYRQAKESGNLSYLGKNHIVMINWSKKTENAIDELLKNQNKKIVLIDELQTTPIQHEQVHY IQGAPTDKNTLTKANILQSKAISVFAKDNITDEISLDGKTLLIGLTIQELLNENKKDIYTSVEVINEQHLSSFKNLSKID KIILSNKPFSNILTQSILENASP
Specific function: May Play A Role In The Defense Against Osmotic Shock. [C]
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 - InterPro: IPR003091 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF07885 Ion_trans_2; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 29789; Mature: 29658
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLYLVKNVLNQILQIKNFKLVTLAILFLVLSSYVLYFIEPDTFSTPFAGFWFVMTTISQ CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCC QGYADILPNTLAGRIYTIILFIIGIGIFGVIIAKWVDGVIQYRQAKESGNLSYLGKNHIV CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE MINWSKKTENAIDELLKNQNKKIVLIDELQTTPIQHEQVHYIQGAPTDKNTLTKANILQS EEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH KAISVFAKDNITDEISLDGKTLLIGLTIQELLNENKKDIYTSVEVINEQHLSSFKNLSKI HHHEEEECCCCCCEEECCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DKIILSNKPFSNILTQSILENASP HHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PLYLVKNVLNQILQIKNFKLVTLAILFLVLSSYVLYFIEPDTFSTPFAGFWFVMTTISQ CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCC QGYADILPNTLAGRIYTIILFIIGIGIFGVIIAKWVDGVIQYRQAKESGNLSYLGKNHIV CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEE MINWSKKTENAIDELLKNQNKKIVLIDELQTTPIQHEQVHYIQGAPTDKNTLTKANILQS EEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH KAISVFAKDNITDEISLDGKTLLIGLTIQELLNENKKDIYTSVEVINEQHLSSFKNLSKI HHHEEEECCCCCCEEECCCCEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH DKIILSNKPFSNILTQSILENASP HHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]