| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is dck [H]
Identifier: 188585314
GI number: 188585314
Start: 703505
End: 704131
Strand: Direct
Name: dck [H]
Synonym: Nther_0678
Alternate gene names: 188585314
Gene position: 703505-704131 (Clockwise)
Preceding gene: 188585313
Following gene: 188585315
Centisome position: 22.22
GC content: 34.29
Gene sequence:
>627_bases ATGGGTCAAGTACCAATTGTAGTCGATGGTATGACGGGTTCGGGAAAAACTACCCTGGTGAATCATTTGGCAAATGAGTT AAATTTGGAAGTTATGCCGGAAGAATTTCGTGATCCCTATAATCTCTTGTACAGATTTGCCGATGATGTTAAATGGTGTT ATCCCATGCAGTTAAACTTTTTGATGACCAGGTATATACAGTATACGGTGGCATCTGAACATGAAAATTATATTCTGGAT AGAAGTATTTATAGTGATCCGGTTTATGCAAAACTTTATTACAATATGGGTTATTTAAGTGAAAAACAGTACGACAATTA CTTAAACTTTTATGATAGCCTGGAAGAAGATATCAAGGAACCAAAATGCATGATAATTTTAAATTGTTCCTTTGATGAGA TTATGCGTCGGATAGTTGATAGAGGCAGATCTGACGAGTTGAAATTATCCAAAGAAGGTTACTGGTGGCCATTATACCAA GCATATCAAGAACATGTTGATAAACTATTAACACAACAAGATCATATGTCAACAAAAGTGATTAGAATAGACACGGAAGA TATTGACTTGGCCAAAAGAGATGAACAATTATTTGATATTTTAAATCTAGCAGAAACGGCTATTTAA
Upstream 100 bases:
>100_bases TTCAAAAAAGATTATGATAAATACGATTCTGACTTCATAATTCAAGTAGCCCAAAAGTAAAAATTTAAGGGTTGAAATAA ATGAAAGGGGGAGCATTTTC
Downstream 100 bases:
>100_bases GGATTCTTTCATCCCAAAAAAAGATGAGAATGTTATAAGGAGGCCAAAAAAGTGAGTTTACCGGAATATGTAGGACCATG TGCATTCGGAATCAAGATGG
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: dAK/dCK [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MGQVPIVVDGMTGSGKTTLVNHLANELNLEVMPEEFRDPYNLLYRFADDVKWCYPMQLNFLMTRYIQYTVASEHENYILD RSIYSDPVYAKLYYNMGYLSEKQYDNYLNFYDSLEEDIKEPKCMIILNCSFDEIMRRIVDRGRSDELKLSKEGYWWPLYQ AYQEHVDKLLTQQDHMSTKVIRIDTEDIDLAKRDEQLFDILNLAETAI
Sequences:
>Translated_208_residues MGQVPIVVDGMTGSGKTTLVNHLANELNLEVMPEEFRDPYNLLYRFADDVKWCYPMQLNFLMTRYIQYTVASEHENYILD RSIYSDPVYAKLYYNMGYLSEKQYDNYLNFYDSLEEDIKEPKCMIILNCSFDEIMRRIVDRGRSDELKLSKEGYWWPLYQ AYQEHVDKLLTQQDHMSTKVIRIDTEDIDLAKRDEQLFDILNLAETAI >Mature_207_residues GQVPIVVDGMTGSGKTTLVNHLANELNLEVMPEEFRDPYNLLYRFADDVKWCYPMQLNFLMTRYIQYTVASEHENYILDR SIYSDPVYAKLYYNMGYLSEKQYDNYLNFYDSLEEDIKEPKCMIILNCSFDEIMRRIVDRGRSDELKLSKEGYWWPLYQA YQEHVDKLLTQQDHMSTKVIRIDTEDIDLAKRDEQLFDILNLAETAI
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.74; =2.7.1.76 [H]
Molecular weight: Translated: 24740; Mature: 24609
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVPIVVDGMTGSGKTTLVNHLANELNLEVMPEEFRDPYNLLYRFADDVKWCYPMQLNF CCCCCEEEECCCCCCHHHHHHHHHHHCCEEECCHHHCCHHHHHHHHHHCCCEECHHHHHH LMTRYIQYTVASEHENYILDRSIYSDPVYAKLYYNMGYLSEKQYDNYLNFYDSLEEDIKE HHHHHHHHHHHCCCCCEEECCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC PKCMIILNCSFDEIMRRIVDRGRSDELKLSKEGYWWPLYQAYQEHVDKLLTQQDHMSTKV CCEEEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE IRIDTEDIDLAKRDEQLFDILNLAETAI EEEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GQVPIVVDGMTGSGKTTLVNHLANELNLEVMPEEFRDPYNLLYRFADDVKWCYPMQLNF CCCCEEEECCCCCCHHHHHHHHHHHCCEEECCHHHCCHHHHHHHHHHCCCEECHHHHHH LMTRYIQYTVASEHENYILDRSIYSDPVYAKLYYNMGYLSEKQYDNYLNFYDSLEEDIKE HHHHHHHHHHHCCCCCEEECCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC PKCMIILNCSFDEIMRRIVDRGRSDELKLSKEGYWWPLYQAYQEHVDKLLTQQDHMSTKV CCEEEEEECCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEE IRIDTEDIDLAKRDEQLFDILNLAETAI EEEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]