| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585315
Identifier: 188585315
GI number: 188585315
Start: 704183
End: 705352
Strand: Direct
Name: 188585315
Synonym: Nther_0679
Alternate gene names: NA
Gene position: 704183-705352 (Clockwise)
Preceding gene: 188585314
Following gene: 188585316
Centisome position: 22.25
GC content: 37.09
Gene sequence:
>1170_bases GTGAGTTTACCGGAATATGTAGGACCATGTGCATTCGGAATCAAGATGGGAGTTGTCTTACCGGGCTCGGATTTAAAGAG TATGATTAAAAGTGAAATTATGAAGATTAACAAAGATGGGCTATTAGAAGACAATGATGCTCTGTGTGTGACAGAATCAA TAGTTGCTAGGGCCCAAGAGAATTATATTACTACTGAGGAAATAGCTGAAGAAGTCACCGATAAATTAAATCTAAAGCCT AATGATACTTTGGGAGTGTTATTTCCAATTTTGAGTCGTAACAGATTTTCGCTAATTCTTGAAGGACTTGCCAAAGCAGT TCCCCGGGGAAAAATTATTGTTCAGCTTTCTCATCCTGACGATGAAGTAGGAAATCAATTAATCCCTCCAGAAAAGTCTC AAGCACTTATAGATAAAGGATACAATGTAATCAAAGCAGAAGAATTGGAAGAAGATTGTATACATCCTATTACGAATGTT AACTATCTTAAGTTATACCGAGATATTATCACAGAGCAGGGAGCAGAAGCAGAGTTATTTGTTTCTAATGATTACCGTGT GATATTGGATTACCATCCTCAAGGTGTGTTATGTGCTGATATCCACACCAGGGAAGAACATAGGAGTAAACTAGAATCCA AGGTAATTACTTGTACTCTTCAAGATTTGTTTAATGATAGCAGCAAGGAATCTTGGTCAGAATGGGGATTATTAGGCAGC AATATGTCTTCGGATAACAAATTAAAACTTGCACCTTACAATGCAGATGAATTTGCCTGTGAACTACAAAAAGAAATTTT AGATGCAACCGGCAAAAAAATCGAAGTAATTATTGGAGGAGATGGTGCATACAAAGATCCTAGTAGTGGTATTTACGAGC TGGCCGATCCTAAACCGGCATTTGGAACTACTCCTGGATTAAGACAACATATGAGAGAAGGAGTAAAATATAAATATCTC ATCGACATGTATCATAATCAAGGGAAATCAGAAAAAGAGATCCAAGAAATTATTGCTAAAGAATCTGAAAAGAAAAAAGG TAAAAATCACGAGATAGAAACTGAAGGGACAACACCCAGGAAAATAGAAGACATCCTAGCAAGCCTGGCCGATTTGGTCA GTGGTTCAGCAGATGCCGGAACACCTGTTATTCTAATCAAAAGTATTTAA
Upstream 100 bases:
>100_bases AGATGAACAATTATTTGATATTTTAAATCTAGCAGAAACGGCTATTTAAGGATTCTTTCATCCCAAAAAAAGATGAGAAT GTTATAAGGAGGCCAAAAAA
Downstream 100 bases:
>100_bases AAACCTCCGGCCGGCTTGGCCGGAGGTTTTTACAAATGGTGTTACTATAATTTCGAGATTAAACAAATAATAAAAAGGAG CTGTCCCAATTGATTCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSLPEYVGPCAFGIKMGVVLPGSDLKSMIKSEIMKINKDGLLEDNDALCVTESIVARAQENYITTEEIAEEVTDKLNLKP NDTLGVLFPILSRNRFSLILEGLAKAVPRGKIIVQLSHPDDEVGNQLIPPEKSQALIDKGYNVIKAEELEEDCIHPITNV NYLKLYRDIITEQGAEAELFVSNDYRVILDYHPQGVLCADIHTREEHRSKLESKVITCTLQDLFNDSSKESWSEWGLLGS NMSSDNKLKLAPYNADEFACELQKEILDATGKKIEVIIGGDGAYKDPSSGIYELADPKPAFGTTPGLRQHMREGVKYKYL IDMYHNQGKSEKEIQEIIAKESEKKKGKNHEIETEGTTPRKIEDILASLADLVSGSADAGTPVILIKSI
Sequences:
>Translated_389_residues MSLPEYVGPCAFGIKMGVVLPGSDLKSMIKSEIMKINKDGLLEDNDALCVTESIVARAQENYITTEEIAEEVTDKLNLKP NDTLGVLFPILSRNRFSLILEGLAKAVPRGKIIVQLSHPDDEVGNQLIPPEKSQALIDKGYNVIKAEELEEDCIHPITNV NYLKLYRDIITEQGAEAELFVSNDYRVILDYHPQGVLCADIHTREEHRSKLESKVITCTLQDLFNDSSKESWSEWGLLGS NMSSDNKLKLAPYNADEFACELQKEILDATGKKIEVIIGGDGAYKDPSSGIYELADPKPAFGTTPGLRQHMREGVKYKYL IDMYHNQGKSEKEIQEIIAKESEKKKGKNHEIETEGTTPRKIEDILASLADLVSGSADAGTPVILIKSI >Mature_388_residues SLPEYVGPCAFGIKMGVVLPGSDLKSMIKSEIMKINKDGLLEDNDALCVTESIVARAQENYITTEEIAEEVTDKLNLKPN DTLGVLFPILSRNRFSLILEGLAKAVPRGKIIVQLSHPDDEVGNQLIPPEKSQALIDKGYNVIKAEELEEDCIHPITNVN YLKLYRDIITEQGAEAELFVSNDYRVILDYHPQGVLCADIHTREEHRSKLESKVITCTLQDLFNDSSKESWSEWGLLGSN MSSDNKLKLAPYNADEFACELQKEILDATGKKIEVIIGGDGAYKDPSSGIYELADPKPAFGTTPGLRQHMREGVKYKYLI DMYHNQGKSEKEIQEIIAKESEKKKGKNHEIETEGTTPRKIEDILASLADLVSGSADAGTPVILIKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43164; Mature: 43032
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPEYVGPCAFGIKMGVVLPGSDLKSMIKSEIMKINKDGLLEDNDALCVTESIVARAQE CCCCHHHCCHHHHEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHH NYITTEEIAEEVTDKLNLKPNDTLGVLFPILSRNRFSLILEGLAKAVPRGKIIVQLSHPD CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC DEVGNQLIPPEKSQALIDKGYNVIKAEELEEDCIHPITNVNYLKLYRDIITEQGAEAELF HHHCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEE VSNDYRVILDYHPQGVLCADIHTREEHRSKLESKVITCTLQDLFNDSSKESWSEWGLLGS EECCEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHCCCCC NMSSDNKLKLAPYNADEFACELQKEILDATGKKIEVIIGGDGAYKDPSSGIYELADPKPA CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEECCCCCCC FGTTPGLRQHMREGVKYKYLIDMYHNQGKSEKEIQEIIAKESEKKKGKNHEIETEGTTPR CCCCHHHHHHHHCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH KIEDILASLADLVSGSADAGTPVILIKSI HHHHHHHHHHHHHCCCCCCCCCEEEEECC >Mature Secondary Structure SLPEYVGPCAFGIKMGVVLPGSDLKSMIKSEIMKINKDGLLEDNDALCVTESIVARAQE CCCHHHCCHHHHEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHH NYITTEEIAEEVTDKLNLKPNDTLGVLFPILSRNRFSLILEGLAKAVPRGKIIVQLSHPD CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCC DEVGNQLIPPEKSQALIDKGYNVIKAEELEEDCIHPITNVNYLKLYRDIITEQGAEAELF HHHCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEE VSNDYRVILDYHPQGVLCADIHTREEHRSKLESKVITCTLQDLFNDSSKESWSEWGLLGS EECCEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHEEEHHHHHCCCCHHHHHHHCCCCC NMSSDNKLKLAPYNADEFACELQKEILDATGKKIEVIIGGDGAYKDPSSGIYELADPKPA CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEECCCCCCC FGTTPGLRQHMREGVKYKYLIDMYHNQGKSEKEIQEIIAKESEKKKGKNHEIETEGTTPR CCCCHHHHHHHHCCCCEEEEEEEHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH KIEDILASLADLVSGSADAGTPVILIKSI HHHHHHHHHHHHHCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA