| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585294
Identifier: 188585294
GI number: 188585294
Start: 679979
End: 681034
Strand: Direct
Name: 188585294
Synonym: Nther_0657
Alternate gene names: NA
Gene position: 679979-681034 (Clockwise)
Preceding gene: 188585292
Following gene: 188585295
Centisome position: 21.48
GC content: 32.1
Gene sequence:
>1056_bases ATGATTGATGAAGGAAGTAGAAAATCAGCTATCAAATTAGGTTTATCTTTAATGATTCTAGTTTTTACAACCGCTCCTGT ATCTGGTCAAGACATAACAAATTTAGAAGAGTTGGATGGTTTAACTGCAGAAGACATGATTAATAGAGGAAAAGAACAGT TGCAAGCGGAAGAGACTCATACAATGAGCGGAGATGGATTAGCAACTATTTCATTGTCCACAAGATGCAGCTCAGATGCC TCTAATAACCACGAGATTCCCGATTTCGAGGTACCTTATCACGTAAAAACAAAAACTCAGTATGATCCCTTTAAATATTA TAGCCAGTACGATATGGAAAATTATTTTCCCTTATTAGATTATTTTCCATTACTATCTAGCGGAAATTCTCTAGAGAGCT TTGGAATCCAAAAAGAAAGTGATGAAATGTTATTAACGGATCAGAAATTGTATCAAAAATATAGAGGCGAGCAAGGCAAA AAATGGGTGGTTGGTGATCTAGCTTTAATGGATATGACAAATTCAATCAAATACTTTATAAGTATGGATCCGTTAACTTC GATAGAAATGTTCCAGGAGTATGATGGAGATGTTAATTTAATTGGTGAAAAAGATATTGATAATCAAGAATACTATGTTG TTGAAAGTAATTTCGATCCTGATACATATATGAATATGCTGGATGATTTTTTTGAATCCCCCGAGATTATTACAGATGAA CATCAAATACCAACCGAATTTGAAGAAGAACTAAAAGATATGGAACAAGAACTTCAAGAACAATGGGAAGAAACCAAAGA AAATTTGCAAGTATCTTTAACTAGAACTAAGTATATAAATCAAGAAAACTTCACTATTGATAAGTTAAATTCTGAGATTG ATTTTAATTTTACTGCTGAAGAAGAAATTCCGGATGAACTGATTGAGCTAGAAGTTGACTTAAACTTTGATACAGAATTA TATATAGAGGATTATGGGCAAGAGTTGCATTTTTCTGATATAACAGAGAATCCCATTTCATATGAAGAATTACTCAATGA AATTATGTTTGAATAA
Upstream 100 bases:
>100_bases AAAAAATTAAAATATATGGAAGGGAATATTTTCTCTTATGGCGAATTTAATTATTGGGAAAATATAGTTAAATTGCATAA TCTCTAAAAGGAGGAGCAAT
Downstream 100 bases:
>100_bases TACTCTGATTAATTACTCAATGAAATGTTATTAGCAGATGGCGTATAAATGGTGTATAAAATGTAAGGGTTATTCCAAAA GTTAAAATAAAGACTTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MIDEGSRKSAIKLGLSLMILVFTTAPVSGQDITNLEELDGLTAEDMINRGKEQLQAEETHTMSGDGLATISLSTRCSSDA SNNHEIPDFEVPYHVKTKTQYDPFKYYSQYDMENYFPLLDYFPLLSSGNSLESFGIQKESDEMLLTDQKLYQKYRGEQGK KWVVGDLALMDMTNSIKYFISMDPLTSIEMFQEYDGDVNLIGEKDIDNQEYYVVESNFDPDTYMNMLDDFFESPEIITDE HQIPTEFEEELKDMEQELQEQWEETKENLQVSLTRTKYINQENFTIDKLNSEIDFNFTAEEEIPDELIELEVDLNFDTEL YIEDYGQELHFSDITENPISYEELLNEIMFE
Sequences:
>Translated_351_residues MIDEGSRKSAIKLGLSLMILVFTTAPVSGQDITNLEELDGLTAEDMINRGKEQLQAEETHTMSGDGLATISLSTRCSSDA SNNHEIPDFEVPYHVKTKTQYDPFKYYSQYDMENYFPLLDYFPLLSSGNSLESFGIQKESDEMLLTDQKLYQKYRGEQGK KWVVGDLALMDMTNSIKYFISMDPLTSIEMFQEYDGDVNLIGEKDIDNQEYYVVESNFDPDTYMNMLDDFFESPEIITDE HQIPTEFEEELKDMEQELQEQWEETKENLQVSLTRTKYINQENFTIDKLNSEIDFNFTAEEEIPDELIELEVDLNFDTEL YIEDYGQELHFSDITENPISYEELLNEIMFE >Mature_351_residues MIDEGSRKSAIKLGLSLMILVFTTAPVSGQDITNLEELDGLTAEDMINRGKEQLQAEETHTMSGDGLATISLSTRCSSDA SNNHEIPDFEVPYHVKTKTQYDPFKYYSQYDMENYFPLLDYFPLLSSGNSLESFGIQKESDEMLLTDQKLYQKYRGEQGK KWVVGDLALMDMTNSIKYFISMDPLTSIEMFQEYDGDVNLIGEKDIDNQEYYVVESNFDPDTYMNMLDDFFESPEIITDE HQIPTEFEEELKDMEQELQEQWEETKENLQVSLTRTKYINQENFTIDKLNSEIDFNFTAEEEIPDELIELEVDLNFDTEL YIEDYGQELHFSDITENPISYEELLNEIMFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40890; Mature: 40890
Theoretical pI: Translated: 3.73; Mature: 3.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDEGSRKSAIKLGLSLMILVFTTAPVSGQDITNLEELDGLTAEDMINRGKEQLQAEETH CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHCCHHHHHHHHHC TMSGDGLATISLSTRCSSDASNNHEIPDFEVPYHVKTKTQYDPFKYYSQYDMENYFPLLD CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCHHH YFPLLSSGNSLESFGIQKESDEMLLTDQKLYQKYRGEQGKKWVVGDLALMDMTNSIKYFI HHHHHCCCCCHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCEEEEE SMDPLTSIEMFQEYDGDVNLIGEKDIDNQEYYVVESNFDPDTYMNMLDDFFESPEIITDE EECCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEECCC HQIPTEFEEELKDMEQELQEQWEETKENLQVSLTRTKYINQENFTIDKLNSEIDFNFTAE CCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHCCCCCCCCHHHCCCEECCEEECC EEIPDELIELEVDLNFDTELYIEDYGQELHFSDITENPISYEELLNEIMFE HHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MIDEGSRKSAIKLGLSLMILVFTTAPVSGQDITNLEELDGLTAEDMINRGKEQLQAEETH CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHCCHHHHHHHHHC TMSGDGLATISLSTRCSSDASNNHEIPDFEVPYHVKTKTQYDPFKYYSQYDMENYFPLLD CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCHHH YFPLLSSGNSLESFGIQKESDEMLLTDQKLYQKYRGEQGKKWVVGDLALMDMTNSIKYFI HHHHHCCCCCHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCEEEEEEEHHHHHCCCEEEEE SMDPLTSIEMFQEYDGDVNLIGEKDIDNQEYYVVESNFDPDTYMNMLDDFFESPEIITDE EECCCHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEECCC HQIPTEFEEELKDMEQELQEQWEETKENLQVSLTRTKYINQENFTIDKLNSEIDFNFTAE CCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHCCCCCCCCHHHCCCEECCEEECC EEIPDELIELEVDLNFDTELYIEDYGQELHFSDITENPISYEELLNEIMFE HHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA