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The map label for this gene is 188585292

Identifier: 188585292

GI number: 188585292

Start: 678154

End: 679308

Strand: Direct

Name: 188585292

Synonym: Nther_0655

Alternate gene names: NA

Gene position: 678154-679308 (Clockwise)

Preceding gene: 188585291

Following gene: 188585294

Centisome position: 21.42

GC content: 32.55

Gene sequence:

>1155_bases
TTGGAAAAGTTCAAAAAAGAGTTACGACGACTTCCTGACATATCTAAGGAGTCTGTTCAAGAATATGAAACACAACAAAA
TGCCATTGTGAATAAAGTTATGGAAATATTAGATAATGAAAAAAATTTAAAGGCCTTGACAAACAATTATCCTGAGAATT
TTTTATATTACAATCAAGATAACTTATCAAAATTATGGTTATCAGCTATTTATAATAATAAATTTGAGTTAGCTATTCCT
TATTTATGCTGGTATTACAGAGCTTATAGTTATGGGGGTTTTTCTGAAGATTTTTTTCGATTGGAATTACAAGCATGGAT
TGCCGCCACTCAGGAACTGCTCTCGTCTTCAGCACTGAAAGAGTTAATGCCTTTTTATCAATGGCTAACAGATCAACAAG
GAAATTTAATAAAACTTGCTAATTCCCAAACCAAATCAGTTTTTAAGATTCCAGCCTGGTGGAAACGAGTGGAGACATCT
TTTTTCTCATCATTGATGCAGGGAGATTTAGACCGTTGCCTTGAGATAACAAAAAGACATGTGACTGCAAAAGAAATAAT
ACCTGAATTCTATATGAATGTATTGCGCCCTGTTATGTACAAAATAGGATATTATTGGGAAATGGGAGATATTAATATGA
TACACGAACAACACGCTACTTCCATTGTTATTAAAGTAAGGCATTATCTTTACAATCAGTATTTGTCATCAACAGAAAAG
GATAAAGGGAAAGTAGTATTTACAACTGCCGCCTCTGATTCAAGCCAACTGGGTATGAAAATAGTGGGAGATTTATTAAG
TCTTTACGGTTGGGATGTGAAGTATCTGGAGAACTTTACAGATAACCAATCAAAACATACTCTCGTTAACCAAATAAAAG
AAATTAATCCTGATCTTATTGGGATATCATTCTCAGTATCATTTAATTTAGTAGAGGTCCACAGATTAATATCAGAAATC
AGAAAATCTGATACATTAAAAAATAATTATATTTTAATAGGTGGGAGAGTAATTAATGAATTTAAGGATATAAATCTGGC
CTCTTTAGTAAATGCGGATAACCAAGCTGAGGGAGCTTATCAGGCTTTAAGAAAAACAGAACGCTGGTGCCAAAACAAAT
TATCAGTTCAAGAAACTAAATCAACAGTAAATTAG

Upstream 100 bases:

>100_bases
TGACAAATAAAAGGACATTTTGACATTCTATAGAATTTAATAACAACCAGCTTATGTTTAGACAATATCCAATTGTTGCA
GATTGAGGGGAGGGGTCAGA

Downstream 100 bases:

>100_bases
CTCCTTGTTTCAAAGGAGCTAATTTCAGACTGTAGACAAATGGCTAGCTAAAACTTGAATTTTAGGATAAATCAGGCCTG
CTAGGTGTAGAAACCTGACT

Product: cobalamin B12-binding domain protein

Products: NA

Alternate protein names: Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MEKFKKELRRLPDISKESVQEYETQQNAIVNKVMEILDNEKNLKALTNNYPENFLYYNQDNLSKLWLSAIYNNKFELAIP
YLCWYYRAYSYGGFSEDFFRLELQAWIAATQELLSSSALKELMPFYQWLTDQQGNLIKLANSQTKSVFKIPAWWKRVETS
FFSSLMQGDLDRCLEITKRHVTAKEIIPEFYMNVLRPVMYKIGYYWEMGDINMIHEQHATSIVIKVRHYLYNQYLSSTEK
DKGKVVFTTAASDSSQLGMKIVGDLLSLYGWDVKYLENFTDNQSKHTLVNQIKEINPDLIGISFSVSFNLVEVHRLISEI
RKSDTLKNNYILIGGRVINEFKDINLASLVNADNQAEGAYQALRKTERWCQNKLSVQETKSTVN

Sequences:

>Translated_384_residues
MEKFKKELRRLPDISKESVQEYETQQNAIVNKVMEILDNEKNLKALTNNYPENFLYYNQDNLSKLWLSAIYNNKFELAIP
YLCWYYRAYSYGGFSEDFFRLELQAWIAATQELLSSSALKELMPFYQWLTDQQGNLIKLANSQTKSVFKIPAWWKRVETS
FFSSLMQGDLDRCLEITKRHVTAKEIIPEFYMNVLRPVMYKIGYYWEMGDINMIHEQHATSIVIKVRHYLYNQYLSSTEK
DKGKVVFTTAASDSSQLGMKIVGDLLSLYGWDVKYLENFTDNQSKHTLVNQIKEINPDLIGISFSVSFNLVEVHRLISEI
RKSDTLKNNYILIGGRVINEFKDINLASLVNADNQAEGAYQALRKTERWCQNKLSVQETKSTVN
>Mature_384_residues
MEKFKKELRRLPDISKESVQEYETQQNAIVNKVMEILDNEKNLKALTNNYPENFLYYNQDNLSKLWLSAIYNNKFELAIP
YLCWYYRAYSYGGFSEDFFRLELQAWIAATQELLSSSALKELMPFYQWLTDQQGNLIKLANSQTKSVFKIPAWWKRVETS
FFSSLMQGDLDRCLEITKRHVTAKEIIPEFYMNVLRPVMYKIGYYWEMGDINMIHEQHATSIVIKVRHYLYNQYLSSTEK
DKGKVVFTTAASDSSQLGMKIVGDLLSLYGWDVKYLENFTDNQSKHTLVNQIKEINPDLIGISFSVSFNLVEVHRLISEI
RKSDTLKNNYILIGGRVINEFKDINLASLVNADNQAEGAYQALRKTERWCQNKLSVQETKSTVN

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44861; Mature: 44861

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFKKELRRLPDISKESVQEYETQQNAIVNKVMEILDNEKNLKALTNNYPENFLYYNQD
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCC
NLSKLWLSAIYNNKFELAIPYLCWYYRAYSYGGFSEDFFRLELQAWIAATQELLSSSALK
CHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELMPFYQWLTDQQGNLIKLANSQTKSVFKIPAWWKRVETSFFSSLMQGDLDRCLEITKRH
HHHHHHHHHHCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTAKEIIPEFYMNVLRPVMYKIGYYWEMGDINMIHEQHATSIVIKVRHYLYNQYLSSTEK
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKGKVVFTTAASDSSQLGMKIVGDLLSLYGWDVKYLENFTDNQSKHTLVNQIKEINPDLI
CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEE
GISFSVSFNLVEVHRLISEIRKSDTLKNNYILIGGRVINEFKDINLASLVNADNQAEGAY
EEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCHHHHHCCCCCCHHHH
QALRKTERWCQNKLSVQETKSTVN
HHHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MEKFKKELRRLPDISKESVQEYETQQNAIVNKVMEILDNEKNLKALTNNYPENFLYYNQD
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEECCC
NLSKLWLSAIYNNKFELAIPYLCWYYRAYSYGGFSEDFFRLELQAWIAATQELLSSSALK
CHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ELMPFYQWLTDQQGNLIKLANSQTKSVFKIPAWWKRVETSFFSSLMQGDLDRCLEITKRH
HHHHHHHHHHCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTAKEIIPEFYMNVLRPVMYKIGYYWEMGDINMIHEQHATSIVIKVRHYLYNQYLSSTEK
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DKGKVVFTTAASDSSQLGMKIVGDLLSLYGWDVKYLENFTDNQSKHTLVNQIKEINPDLI
CCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEE
GISFSVSFNLVEVHRLISEIRKSDTLKNNYILIGGRVINEFKDINLASLVNADNQAEGAY
EEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHCCCHHHHHCCCCCCHHHH
QALRKTERWCQNKLSVQETKSTVN
HHHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA