Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188585211

Identifier: 188585211

GI number: 188585211

Start: 601552

End: 602991

Strand: Direct

Name: 188585211

Synonym: Nther_0573

Alternate gene names: NA

Gene position: 601552-602991 (Clockwise)

Preceding gene: 188585210

Following gene: 188585214

Centisome position: 19.0

GC content: 36.39

Gene sequence:

>1440_bases
ATGGTGAAGAAGTTGCTTATAATCTTAAGTCTCGCTTTAGTAATGATTTTTTCAGTTACAGCCTGTAATAATTCGGAAAC
AACAGATTCTCCCAAAGATAACGAAGAAAACATTGATCAAGAAGAAAAAAATGAAAATTCTAAAGACCAGGATCAAAACG
ATGATAGTGATGAGCAAACTGAGAAAGAAGATGAAGAAGAGAAGGATCTAGGGCCTGAATTCACTTATCCTGAAGATGGA
GTCAGAGGAATTTATGTAACAGGTCACACTGCAGGCGGCTCTCGTATGGAAGAATTAATTGAATTAGTTGATGATACGGA
GTTAAATTCTATGGTTATTGATGTCAAAGATGATTACGGTAATATAACATTTAAACTTGATGGAACAGAGTTTGACGAAT
TCAGTAAAAACTATATTTCCGATCCCGAAGAAATGCTTGAAAAATTATCAGAACACGATATTTACCCTATTGCTCGAGTC
GTGGTCTTTAAAGATACAGTTTTGGCTGAGGAACAGCCAGAGTATTCTTTTAGAAGATCAGATGGTTCTGTTTGGAAAAA
TAGTGGAGGAGAAGCTTTTGTGAATCCTTATAAGGAAGAAGTTTGGGATTACAATTTAAAAATAGCTGAAAAAGCTGCTG
AAATGGGCTTTCAAGAAATTCAATTTGACTATGTAAGATTTCCTGAAGGTCATGGCAGTAGAGCTGATGAATTAGAATAC
TCCTTAGGAAATTATACTGAAGAGGAATTAACTCCACGTATTGAAGAAGAGTGGGAAGAAATGTTGGAAGAACAAGCAAG
TGATAATCCAGATTTTACAGAGTACAACATTGATGAGGAAGATGTTGTCGAAAAAAATGAGGATATTTTAGAAGATGAAG
AAGAAATCAAGGAATACAAAGCAGAAGAATTAAAAGAAAAAGCCTCGCCTCCGGAATATGAGTACGGTCTTGCCCGGGTA
ATGGCAGTCTCAGATTTCACAGAATATGCCTATGATCGATTACAATCCTATGATGTAGATGTGTCCGTGGATGTTTTTGG
TTACACTGTAACTGTTCCCGAATCAAGAGAAATTGGACAGAACTTCTTTAGTATACTCCAAAATGTCGATGTGATTTCTT
CTATGATTTATCCAAGCCATTGGGGACCAGGGTATTTTGGGATCTCTCAGCCTGATACTGAACCTTATGAATTAGTTTAC
AAATATACCGAAAGAGAAAATGAATTACTTGATAAATTGGAAGAACCACCTATATCACGACCTTGGATTCAAGATTTTAC
TGCTAGCTGGTTAGGACAAGGTAATTACATTTCATATGGAGTTGACGAGGTAGAAGATCAAATTCGAGCCTTAAACGAAC
AAGGTGTAGAAGAATTCCTGCTTTGGAACGCTAGTAACCGATACACCAAAGGGGTAGATTATAAACCCTTAGAAGATTAG

Upstream 100 bases:

>100_bases
AGGAACTCATCCCCTCCATGCCGAATATAAGTAAATACAAATTTATATCTATCTTTATGTCAATATAAATTACACAATAA
TAATTTGCAAAGAGGTGTTC

Downstream 100 bases:

>100_bases
ATTTTATATCTATCAATAACTATTTAAAAGCAACATTTAACATTAAAAAGAGCCCGGATAAAAATCCGGGCTCTTTTATG
ACTAGTTTCAATTTAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MVKKLLIILSLALVMIFSVTACNNSETTDSPKDNEENIDQEEKNENSKDQDQNDDSDEQTEKEDEEEKDLGPEFTYPEDG
VRGIYVTGHTAGGSRMEELIELVDDTELNSMVIDVKDDYGNITFKLDGTEFDEFSKNYISDPEEMLEKLSEHDIYPIARV
VVFKDTVLAEEQPEYSFRRSDGSVWKNSGGEAFVNPYKEEVWDYNLKIAEKAAEMGFQEIQFDYVRFPEGHGSRADELEY
SLGNYTEEELTPRIEEEWEEMLEEQASDNPDFTEYNIDEEDVVEKNEDILEDEEEIKEYKAEELKEKASPPEYEYGLARV
MAVSDFTEYAYDRLQSYDVDVSVDVFGYTVTVPESREIGQNFFSILQNVDVISSMIYPSHWGPGYFGISQPDTEPYELVY
KYTERENELLDKLEEPPISRPWIQDFTASWLGQGNYISYGVDEVEDQIRALNEQGVEEFLLWNASNRYTKGVDYKPLED

Sequences:

>Translated_479_residues
MVKKLLIILSLALVMIFSVTACNNSETTDSPKDNEENIDQEEKNENSKDQDQNDDSDEQTEKEDEEEKDLGPEFTYPEDG
VRGIYVTGHTAGGSRMEELIELVDDTELNSMVIDVKDDYGNITFKLDGTEFDEFSKNYISDPEEMLEKLSEHDIYPIARV
VVFKDTVLAEEQPEYSFRRSDGSVWKNSGGEAFVNPYKEEVWDYNLKIAEKAAEMGFQEIQFDYVRFPEGHGSRADELEY
SLGNYTEEELTPRIEEEWEEMLEEQASDNPDFTEYNIDEEDVVEKNEDILEDEEEIKEYKAEELKEKASPPEYEYGLARV
MAVSDFTEYAYDRLQSYDVDVSVDVFGYTVTVPESREIGQNFFSILQNVDVISSMIYPSHWGPGYFGISQPDTEPYELVY
KYTERENELLDKLEEPPISRPWIQDFTASWLGQGNYISYGVDEVEDQIRALNEQGVEEFLLWNASNRYTKGVDYKPLED
>Mature_479_residues
MVKKLLIILSLALVMIFSVTACNNSETTDSPKDNEENIDQEEKNENSKDQDQNDDSDEQTEKEDEEEKDLGPEFTYPEDG
VRGIYVTGHTAGGSRMEELIELVDDTELNSMVIDVKDDYGNITFKLDGTEFDEFSKNYISDPEEMLEKLSEHDIYPIARV
VVFKDTVLAEEQPEYSFRRSDGSVWKNSGGEAFVNPYKEEVWDYNLKIAEKAAEMGFQEIQFDYVRFPEGHGSRADELEY
SLGNYTEEELTPRIEEEWEEMLEEQASDNPDFTEYNIDEEDVVEKNEDILEDEEEIKEYKAEELKEKASPPEYEYGLARV
MAVSDFTEYAYDRLQSYDVDVSVDVFGYTVTVPESREIGQNFFSILQNVDVISSMIYPSHWGPGYFGISQPDTEPYELVY
KYTERENELLDKLEEPPISRPWIQDFTASWLGQGNYISYGVDEVEDQIRALNEQGVEEFLLWNASNRYTKGVDYKPLED

Specific function: Unknown

COG id: COG1306

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55479; Mature: 55479

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKLLIILSLALVMIFSVTACNNSETTDSPKDNEENIDQEEKNENSKDQDQNDDSDEQT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH
EKEDEEEKDLGPEFTYPEDGVRGIYVTGHTAGGSRMEELIELVDDTELNSMVIDVKDDYG
HHHCHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC
NITFKLDGTEFDEFSKNYISDPEEMLEKLSEHDIYPIARVVVFKDTVLAEEQPEYSFRRS
CEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCC
DGSVWKNSGGEAFVNPYKEEVWDYNLKIAEKAAEMGFQEIQFDYVRFPEGHGSRADELEY
CCCHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHCCHHEECCCCCCCCHHHHHH
SLGNYTEEELTPRIEEEWEEMLEEQASDNPDFTEYNIDEEDVVEKNEDILEDEEEIKEYK
HHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHCCHHHHHHHH
AEELKEKASPPEYEYGLARVMAVSDFTEYAYDRLQSYDVDVSVDVFGYTVTVPESREIGQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHH
NFFSILQNVDVISSMIYPSHWGPGYFGISQPDTEPYELVYKYTERENELLDKLEEPPISR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PWIQDFTASWLGQGNYISYGVDEVEDQIRALNEQGVEEFLLWNASNRYTKGVDYKPLED
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKKLLIILSLALVMIFSVTACNNSETTDSPKDNEENIDQEEKNENSKDQDQNDDSDEQT
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH
EKEDEEEKDLGPEFTYPEDGVRGIYVTGHTAGGSRMEELIELVDDTELNSMVIDVKDDYG
HHHCHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC
NITFKLDGTEFDEFSKNYISDPEEMLEKLSEHDIYPIARVVVFKDTVLAEEQPEYSFRRS
CEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCC
DGSVWKNSGGEAFVNPYKEEVWDYNLKIAEKAAEMGFQEIQFDYVRFPEGHGSRADELEY
CCCHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHCCHHEECCCCCCCCHHHHHH
SLGNYTEEELTPRIEEEWEEMLEEQASDNPDFTEYNIDEEDVVEKNEDILEDEEEIKEYK
HHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHCCHHHHHHHH
AEELKEKASPPEYEYGLARVMAVSDFTEYAYDRLQSYDVDVSVDVFGYTVTVPESREIGQ
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHH
NFFSILQNVDVISSMIYPSHWGPGYFGISQPDTEPYELVYKYTERENELLDKLEEPPISR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PWIQDFTASWLGQGNYISYGVDEVEDQIRALNEQGVEEFLLWNASNRYTKGVDYKPLED
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA