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The map label for this gene is yhbA [H]

Identifier: 188585132

GI number: 188585132

Start: 521389

End: 522603

Strand: Direct

Name: yhbA [H]

Synonym: Nther_0493

Alternate gene names: 188585132

Gene position: 521389-522603 (Clockwise)

Preceding gene: 188585131

Following gene: 188585133

Centisome position: 16.47

GC content: 36.46

Gene sequence:

>1215_bases
ATGAACAGCTTAAGCAAACTGCGACAAATGGCTTTAAATAATGGCTTTGTTTCTACTGGAGTCATTTCTCCTGATGAGTA
TAAAGAAGGGAAATCAAGACAGGAGCAAGCTCAAGCTCGAGGGCATCTGATGCCATTTATCAATAAATCACAAAATTTAG
CTACTAGAGTAAATCCTTCTAAATACGCAAATTGGGTAAAAACTGTCATTTTAGTCCTATATCCTTACGGCGGGTCTAAT
GGGAATCATCCCCCAAAGCCAGATGATGGCGTGTTACGAGGTAGATTTTCGAAAATTTCCTGGGGAAGAGACTATCACTT
AGTAGTTAAGAAAGCTTTGCAAGATTTAGCTAGTGATTTGGTAAATGAGGATATCATCTCGGAGACTTATGAAACATTTA
TTGACACCAGCCCTTTTGCTGAGCGAGAACTTGCCTTTAGAGCTGGATTAGGTTACCCAGGCAGACATGGTTGTTTAATT
AATCCAACTTATGGCTCCTTTGTGGTAATTGGTGGAATTTTAACTGATACAATGTTACCTACTAATGAACAACCTGTCGA
TGAGATTTTTTCTACTTGTAAATCTTGTGATGAATGTATTACAGTATGTCCTGGGAAAGCCCTGGAAGACTCTAATCATG
AGAGTAAAATACAACTAGAAAATTGCGCAGCTTACCTAACAGTGGTCAAAGGAATAATTCCTCGCAAGAAACGTCCTATT
ATTAAAGATTATTTATATGGCTGTGATGAGTGTCAGAATGTTTGCCCTGAAAATTCAAGTAATAATTTTGGTTCCACTAA
TAATGATTGCGTAAAAACCTTTTCTTTGCCAAAATGGGATGAACAACACCTGACAATAGAAGATCTGTATCCTCAAATAA
CTAAAATTTTAAATTTAAGCAATCAAACATTTAGAAAAAAGTATAAGGATAATGCAGTCTTTTGGCGCGGCAAACAAGTT
CTTAAGAGAAATGCTGTTATTGCTTTGGGAAATTTAAAAGATCCCAAGGGATTACCACTTATACTAGAAACATTAGCTAA
TCCAAGTCCTATTATCAGGGCGCATGTACCCTGGTCTCTGGAACAAATTAGTACCCAATTGCCTATTCATAAAAAGAGTT
GGATATATCACAAATTGGAGCAGCAATATTTGAAAGAATCAGACCCGCTAGTAATTGATGAACTGAAGTCTTCACTGTTA
AATTTGTCGAAATAA

Upstream 100 bases:

>100_bases
TGTAAGGCCAGGAAGCCTCAATGTGAAAATTGCAGTATTATAGAACATTGTAAGTACTATCATGATAACTATCAATATCC
AAACAGTACGGGGAGATAAT

Downstream 100 bases:

>100_bases
GTCTTTTATTAAAATATAGCTTATGATAAAATACTTTATTGTGATGAGTTTGTTATATTTTTTATCTAAATCGAGAAATC
TTTAACAAGGGAGGGTAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MNSLSKLRQMALNNGFVSTGVISPDEYKEGKSRQEQAQARGHLMPFINKSQNLATRVNPSKYANWVKTVILVLYPYGGSN
GNHPPKPDDGVLRGRFSKISWGRDYHLVVKKALQDLASDLVNEDIISETYETFIDTSPFAERELAFRAGLGYPGRHGCLI
NPTYGSFVVIGGILTDTMLPTNEQPVDEIFSTCKSCDECITVCPGKALEDSNHESKIQLENCAAYLTVVKGIIPRKKRPI
IKDYLYGCDECQNVCPENSSNNFGSTNNDCVKTFSLPKWDEQHLTIEDLYPQITKILNLSNQTFRKKYKDNAVFWRGKQV
LKRNAVIALGNLKDPKGLPLILETLANPSPIIRAHVPWSLEQISTQLPIHKKSWIYHKLEQQYLKESDPLVIDELKSSLL
NLSK

Sequences:

>Translated_404_residues
MNSLSKLRQMALNNGFVSTGVISPDEYKEGKSRQEQAQARGHLMPFINKSQNLATRVNPSKYANWVKTVILVLYPYGGSN
GNHPPKPDDGVLRGRFSKISWGRDYHLVVKKALQDLASDLVNEDIISETYETFIDTSPFAERELAFRAGLGYPGRHGCLI
NPTYGSFVVIGGILTDTMLPTNEQPVDEIFSTCKSCDECITVCPGKALEDSNHESKIQLENCAAYLTVVKGIIPRKKRPI
IKDYLYGCDECQNVCPENSSNNFGSTNNDCVKTFSLPKWDEQHLTIEDLYPQITKILNLSNQTFRKKYKDNAVFWRGKQV
LKRNAVIALGNLKDPKGLPLILETLANPSPIIRAHVPWSLEQISTQLPIHKKSWIYHKLEQQYLKESDPLVIDELKSSLL
NLSK
>Mature_404_residues
MNSLSKLRQMALNNGFVSTGVISPDEYKEGKSRQEQAQARGHLMPFINKSQNLATRVNPSKYANWVKTVILVLYPYGGSN
GNHPPKPDDGVLRGRFSKISWGRDYHLVVKKALQDLASDLVNEDIISETYETFIDTSPFAERELAFRAGLGYPGRHGCLI
NPTYGSFVVIGGILTDTMLPTNEQPVDEIFSTCKSCDECITVCPGKALEDSNHESKIQLENCAAYLTVVKGIIPRKKRPI
IKDYLYGCDECQNVCPENSSNNFGSTNNDCVKTFSLPKWDEQHLTIEDLYPQITKILNLSNQTFRKKYKDNAVFWRGKQV
LKRNAVIALGNLKDPKGLPLILETLANPSPIIRAHVPWSLEQISTQLPIHKKSWIYHKLEQQYLKESDPLVIDELKSSLL
NLSK

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=365, Percent_Identity=28.2191780821918, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 45514; Mature: 45514

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLSKLRQMALNNGFVSTGVISPDEYKEGKSRQEQAQARGHLMPFINKSQNLATRVNPS
CCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCHH
KYANWVKTVILVLYPYGGSNGNHPPKPDDGVLRGRFSKISWGRDYHLVVKKALQDLASDL
HHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHHH
VNEDIISETYETFIDTSPFAERELAFRAGLGYPGRHGCLINPTYGSFVVIGGILTDTMLP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEHHHHHHCCCC
TNEQPVDEIFSTCKSCDECITVCPGKALEDSNHESKIQLENCAAYLTVVKGIIPRKKRPI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCH
IKDYLYGCDECQNVCPENSSNNFGSTNNDCVKTFSLPKWDEQHLTIEDLYPQITKILNLS
HHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHHCCC
NQTFRKKYKDNAVFWRGKQVLKRNAVIALGNLKDPKGLPLILETLANPSPIIRAHVPWSL
CHHHHHHHCCCCEEECCHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCH
EQISTQLPIHKKSWIYHKLEQQYLKESDPLVIDELKSSLLNLSK
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCC
>Mature Secondary Structure
MNSLSKLRQMALNNGFVSTGVISPDEYKEGKSRQEQAQARGHLMPFINKSQNLATRVNPS
CCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHCCCHH
KYANWVKTVILVLYPYGGSNGNHPPKPDDGVLRGRFSKISWGRDYHLVVKKALQDLASDL
HHHHHHHHHHHHEECCCCCCCCCCCCCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHHH
VNEDIISETYETFIDTSPFAERELAFRAGLGYPGRHGCLINPTYGSFVVIGGILTDTMLP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEHHHHHHCCCC
TNEQPVDEIFSTCKSCDECITVCPGKALEDSNHESKIQLENCAAYLTVVKGIIPRKKRPI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCH
IKDYLYGCDECQNVCPENSSNNFGSTNNDCVKTFSLPKWDEQHLTIEDLYPQITKILNLS
HHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHHHHHCCC
NQTFRKKYKDNAVFWRGKQVLKRNAVIALGNLKDPKGLPLILETLANPSPIIRAHVPWSL
CHHHHHHHCCCCEEECCHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCEEEEECCCCH
EQISTQLPIHKKSWIYHKLEQQYLKESDPLVIDELKSSLLNLSK
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]