| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ftsW [H]
Identifier: 188528352
GI number: 188528352
Start: 1584538
End: 1585704
Strand: Direct
Name: ftsW [H]
Synonym: HPSH_08130
Alternate gene names: 188528352
Gene position: 1584538-1585704 (Clockwise)
Preceding gene: 188528346
Following gene: 188528355
Centisome position: 98.51
GC content: 44.64
Gene sequence:
>1167_bases ATGACTACAGACAAAAGCCTGTTTTTTTGCGCTTCGCTATTGATTTTTTTGGGGGTATTGATGAGCTATTCGCTCTCAAC TTACACCACAGTGGTGCTGTATCATTATGGGGAATTCCATTTTTTCATACGACAGCTTGTGAGCGCGATCATGGGGATTG TTATCATGTGGGGGTTGTCTAGGGTTGATCCTAGCAAGTGGTTTGGCCGTTTGGGGTTTTTTCTTCTCTTTATCCCATTA TTACTCATTATTGGCATGTTTTTTTTGCCAGAAAGCCTTTCCAGTAGTGCGGGAGGGGCGAAGCGATGGATTCGTTTGGG GTTTTTCTCGCTCGCACCCTTGGAGTTTTTAAAGATTGGTTTCACTTTTTTTCTTGCGTGGAGTTTGTCTCGCACCTTTG TGGCAAAAGAAAAGGCTAGTGTTAAAGAAGAACTGATCATTTTTGGGCCTTATTCAGTGGTGTTTGTGGTATTAGCGGTT GGGGTGGGGTTTTTGCAAAACGATTTGGGGCAGATCATTCTTTTGGGGGCAGTTTTAATCATGCTATTAGTCTTTTCTGG AGGGAGCGCGCATTTGTTTGGCTTGATTGTTTTAGGGGCGCTTGCGATCAGCGTTTTAGCGATTGTTACAAGCCCTCATA GGATCTTGCGCGTGAAATTGTGGTGGTCTAATTTGCAAAATTCGCTTTTCACGCTTTTGCCGGATAAATTAGCGAACGCT CTTAGAATAAGCGACTTGCCCGAATCCTATCAAGTCTTTCATGCAGGCAACGCCATGCATAATGGGGGGTTGTTTGGGCA AGGGCTTGGGCTAGGGCAAATCAAGCTTGGGTTTTTGAGCGAAGTGCATACGGATATGGTTCTAGCTGGGATCGCCGAAG AATGGGGGTTTTTGGGGCTATGCGTTTGTTTTATTTTGTTTTCTGTTTTGATTGTTTTGATTTTTAGGATCGCTAACCGC TTGAAAGAGCCAAAATACTCGCTATTTTGCGTGGGTGTGGCACTACTCATCAGTTTTTCTTTAGTGATCAACGCCTTTGG GGTGGGAGGGATTTTTCCGGTTAAAGGTCTAGCGGTGCCGTTTTTGAGCTATGGAGGGAGTTCGCTTTTAGCGAATTGTA TCGCTATAGGGCTTGTTTTAAGCCTAGCGCGATACACGAAGGGCTAA
Upstream 100 bases:
>100_bases AGCTTGAGTGCTAAGATAATTCAGAGCCATTATAGTGTAAAATACCCCTAAAATACCTTAAGATAACGCCTATTTAAAAA ACCAAGATAAGGAAATCCTA
Downstream 100 bases:
>100_bases AAAATACTAGCCCTTTTTAAAGATTAATGCCATAAAAAGGGTTCAATTTCTGCATCTTTCAAATCAAAAACCACTTTATA GTAGTCTTTAACAATCGCAT
Product: putative rod shape-determining protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTTDKSLFFCASLLIFLGVLMSYSLSTYTTVVLYHYGEFHFFIRQLVSAIMGIVIMWGLSRVDPSKWFGRLGFFLLFIPL LLIIGMFFLPESLSSSAGGAKRWIRLGFFSLAPLEFLKIGFTFFLAWSLSRTFVAKEKASVKEELIIFGPYSVVFVVLAV GVGFLQNDLGQIILLGAVLIMLLVFSGGSAHLFGLIVLGALAISVLAIVTSPHRILRVKLWWSNLQNSLFTLLPDKLANA LRISDLPESYQVFHAGNAMHNGGLFGQGLGLGQIKLGFLSEVHTDMVLAGIAEEWGFLGLCVCFILFSVLIVLIFRIANR LKEPKYSLFCVGVALLISFSLVINAFGVGGIFPVKGLAVPFLSYGGSSLLANCIAIGLVLSLARYTKG
Sequences:
>Translated_388_residues MTTDKSLFFCASLLIFLGVLMSYSLSTYTTVVLYHYGEFHFFIRQLVSAIMGIVIMWGLSRVDPSKWFGRLGFFLLFIPL LLIIGMFFLPESLSSSAGGAKRWIRLGFFSLAPLEFLKIGFTFFLAWSLSRTFVAKEKASVKEELIIFGPYSVVFVVLAV GVGFLQNDLGQIILLGAVLIMLLVFSGGSAHLFGLIVLGALAISVLAIVTSPHRILRVKLWWSNLQNSLFTLLPDKLANA LRISDLPESYQVFHAGNAMHNGGLFGQGLGLGQIKLGFLSEVHTDMVLAGIAEEWGFLGLCVCFILFSVLIVLIFRIANR LKEPKYSLFCVGVALLISFSLVINAFGVGGIFPVKGLAVPFLSYGGSSLLANCIAIGLVLSLARYTKG >Mature_387_residues TTDKSLFFCASLLIFLGVLMSYSLSTYTTVVLYHYGEFHFFIRQLVSAIMGIVIMWGLSRVDPSKWFGRLGFFLLFIPLL LIIGMFFLPESLSSSAGGAKRWIRLGFFSLAPLEFLKIGFTFFLAWSLSRTFVAKEKASVKEELIIFGPYSVVFVVLAVG VGFLQNDLGQIILLGAVLIMLLVFSGGSAHLFGLIVLGALAISVLAIVTSPHRILRVKLWWSNLQNSLFTLLPDKLANAL RISDLPESYQVFHAGNAMHNGGLFGQGLGLGQIKLGFLSEVHTDMVLAGIAEEWGFLGLCVCFILFSVLIVLIFRIANRL KEPKYSLFCVGVALLISFSLVINAFGVGGIFPVKGLAVPFLSYGGSSLLANCIAIGLVLSLARYTKG
Specific function: This is a septum-peptidoglycan biosynthetic protein, involved in cell wall formation. Plays a role in the stabilization of the ftsZ ring during cell division [H]
COG id: COG0772
COG function: function code D; Bacterial cell division membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsW/rodA/spoVE family [H]
Homologues:
Organism=Escherichia coli, GI1786277, Length=299, Percent_Identity=29.4314381270903, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1786853, Length=350, Percent_Identity=28, Blast_Score=82, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001182 - InterPro: IPR018365 [H]
Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]
EC number: NA
Molecular weight: Translated: 42394; Mature: 42263
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00428 FTSW_RODA_SPOVE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDKSLFFCASLLIFLGVLMSYSLSTYTTVVLYHYGEFHFFIRQLVSAIMGIVIMWGLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVDPSKWFGRLGFFLLFIPLLLIIGMFFLPESLSSSAGGAKRWIRLGFFSLAPLEFLKIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FTFFLAWSLSRTFVAKEKASVKEELIIFGPYSVVFVVLAVGVGFLQNDLGQIILLGAVLI HHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVFSGGSAHLFGLIVLGALAISVLAIVTSPHRILRVKLWWSNLQNSLFTLLPDKLANA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHH LRISDLPESYQVFHAGNAMHNGGLFGQGLGLGQIKLGFLSEVHTDMVLAGIAEEWGFLGL HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVCFILFSVLIVLIFRIANRLKEPKYSLFCVGVALLISFSLVINAFGVGGIFPVKGLAVP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FLSYGGSSLLANCIAIGLVLSLARYTKG HHHCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTDKSLFFCASLLIFLGVLMSYSLSTYTTVVLYHYGEFHFFIRQLVSAIMGIVIMWGLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RVDPSKWFGRLGFFLLFIPLLLIIGMFFLPESLSSSAGGAKRWIRLGFFSLAPLEFLKIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FTFFLAWSLSRTFVAKEKASVKEELIIFGPYSVVFVVLAVGVGFLQNDLGQIILLGAVLI HHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVFSGGSAHLFGLIVLGALAISVLAIVTSPHRILRVKLWWSNLQNSLFTLLPDKLANA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHH LRISDLPESYQVFHAGNAMHNGGLFGQGLGLGQIKLGFLSEVHTDMVLAGIAEEWGFLGL HHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVCFILFSVLIVLIFRIANRLKEPKYSLFCVGVALLISFSLVINAFGVGGIFPVKGLAVP HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FLSYGGSSLLANCIAIGLVLSLARYTKG HHHCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]