Click here to switch to the map view.

The map label for this gene is 188528346

Identifier: 188528346

GI number: 188528346

Start: 1579110

End: 1579967

Strand: Direct

Name: 188528346

Synonym: HPSH_08100

Alternate gene names: NA

Gene position: 1579110-1579967 (Clockwise)

Preceding gene: 188528345

Following gene: 188528352

Centisome position: 98.17

GC content: 43.01

Gene sequence:

>858_bases
ATGAAAGAATTCAAGATTCTAATCATCCTTATTGTGGTGATAGGCGTGATTTATTATGGGGTTGAGCCTTATGCGCATTC
GGTGATGCACCCTAAAGTCGCTCCGGCAGATTTTGCTTTCAAGGATTTAGAGCCTATGGATTTAAAAAATGGCGACGCTA
ATAAGGGCAAACAGCTTGTAGCCGAAAATTGCACCGCTTGCCATGGCATTAAATCTCAAAACATTCCAGCCCCTATGGAC
AGCCTTAGCGCGAGCAACTCTTTTGGGGTCGTGCCACCGGATTTAAGCCATGTGGCGGGGGTTTTGAGCGCGAATTTCTT
AGCCCACTTCATCAAAGATCCTGTGAAAACGGCGAAATTGAGCCATAAATTCAACGATGAAAGGCCATATCCTATGCCGG
CGTTTTCTCAATTTAGCGATAAAGATTTGAGCGATATTGTGGCGTATCTCACTTCTATTTTGCCTAAAAATTTGAGCGAT
AAGGAAGTGTTCGCGCAAAGCTGTCAAAGGTGTCATAGCCTGGATTATGCTAAAGATAAGGCTTTTAGCGATCCTAAAGA
TTTAGCCAATTATTTAGGCTCTCATGCGCCTGATTTGTCCATGATGATTAGAGCTAAAGGCGAACATGGCTTGAATATTT
TCATCAACGATCCGCAAAAGCTTTTGCCTGGCACGGCTATGCCTAGAGTGGGGTTGAATGAAAAGGCTCAAAAACAAGTC
ATCGCATATTTGGAAAAAGCGGGCGATAGGAAAAAACATGAAAGGAATACCTTAGGGATAAAAATCATGATTTTCTTTGC
GGTGCTGTCGTTCTTGGCTTATGCGTGGAAAAGAAAAGTTTGGAGCGAAGTGCATTGA

Upstream 100 bases:

>100_bases
AATACATTGGCTTAGTGGGTTCAATCACTTTCTTGGCCCTTTTCTTTGTGGTATTGCCCATTATCACTATCGCCGAGAGC
AAGAAACAAGGGGGTGCTAG

Downstream 100 bases:

>100_bases
ATTAAAAAAAAGGGGGGGTATGGTTTTATGATTTTTGATCTGTGGCGGGTTGTTTGAATGGCGTTTTCAAAACGACCTTT
ATTTTAGGATTTTATGATTA

Product: ubiquinol cytochrome c oxidoreductase, cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: Ubiquinol-Cytochrome C Reductase Cytochrome C1 Subunit; Cytochrome C Subfamily Protein; Ubiquinol-Cytochrome C Reductase Cytochrome C Subunit; Ubiquinol-Cytochrome C Reductase Cytochrome Subunit C; Cytochrome C Class I

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKEFKILIILIVVIGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLVAENCTACHGIKSQNIPAPMD
SLSASNSFGVVPPDLSHVAGVLSANFLAHFIKDPVKTAKLSHKFNDERPYPMPAFSQFSDKDLSDIVAYLTSILPKNLSD
KEVFAQSCQRCHSLDYAKDKAFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLNEKAQKQV
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH

Sequences:

>Translated_285_residues
MKEFKILIILIVVIGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLVAENCTACHGIKSQNIPAPMD
SLSASNSFGVVPPDLSHVAGVLSANFLAHFIKDPVKTAKLSHKFNDERPYPMPAFSQFSDKDLSDIVAYLTSILPKNLSD
KEVFAQSCQRCHSLDYAKDKAFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLNEKAQKQV
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH
>Mature_285_residues
MKEFKILIILIVVIGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLVAENCTACHGIKSQNIPAPMD
SLSASNSFGVVPPDLSHVAGVLSANFLAHFIKDPVKTAKLSHKFNDERPYPMPAFSQFSDKDLSDIVAYLTSILPKNLSD
KEVFAQSCQRCHSLDYAKDKAFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLNEKAQKQV
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH

Specific function: Unknown

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.10.2.2

Molecular weight: Translated: 31700; Mature: 31700

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFKILIILIVVIGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHH
AENCTACHGIKSQNIPAPMDSLSASNSFGVVPPDLSHVAGVLSANFLAHFIKDPVKTAKL
HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHKFNDERPYPMPAFSQFSDKDLSDIVAYLTSILPKNLSDKEVFAQSCQRCHSLDYAKDK
HHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH
AFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLNEKAQKQV
CCCCHHHHHHHHCCCCCCHHHHEEECCCCCCEEEECCHHHHCCCCCCCCCCCCHHHHHHH
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEFKILIILIVVIGVIYYGVEPYAHSVMHPKVAPADFAFKDLEPMDLKNGDANKGKQLV
CCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHH
AENCTACHGIKSQNIPAPMDSLSASNSFGVVPPDLSHVAGVLSANFLAHFIKDPVKTAKL
HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SHKFNDERPYPMPAFSQFSDKDLSDIVAYLTSILPKNLSDKEVFAQSCQRCHSLDYAKDK
HHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHH
AFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNIFINDPQKLLPGTAMPRVGLNEKAQKQV
CCCCHHHHHHHHCCCCCCHHHHEEECCCCCCEEEECCHHHHCCCCCCCCCCCCHHHHHHH
IAYLEKAGDRKKHERNTLGIKIMIFFAVLSFLAYAWKRKVWSEVH
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA