| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528247
Identifier: 188528247
GI number: 188528247
Start: 1468414
End: 1468518
Strand: Direct
Name: 188528247
Synonym: HPSH_07565
Alternate gene names: NA
Gene position: 1468414-1468518 (Clockwise)
Preceding gene: 188528239
Following gene: 188528263
Centisome position: 91.29
GC content: 31.43
Gene sequence:
>105_bases ATGCCTAAAACTAATTTCATGAATGTCCTTTATAAGATTTGCGCTTTAGAGCTGCTCAACACTTTTGCTTTCAGTATTTT ATTGCTTTCTAAATTTTTCGCTTGA
Upstream 100 bases:
>100_bases CACGACATGCGCGTTTTTAGACGCCACGACAAAAACTTCAATTTCTTTGGGTAATTTTTCTAAAAACCGCAAGGCTAGGG GTATCCCGCTCGCCCCACTG
Downstream 100 bases:
>100_bases ATGATTTGATTGAGCGCGCCATTTTCTAGGGCTTTTAGGCTTATTTCTATGCTGATTTGCCCCTCTTCATACACCCCGGT GATAATGTCGTTTTTACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 34; Mature: 33
Protein sequence:
>34_residues MPKTNFMNVLYKICALELLNTFAFSILLLSKFFA
Sequences:
>Translated_34_residues MPKTNFMNVLYKICALELLNTFAFSILLLSKFFA >Mature_33_residues PKTNFMNVLYKICALELLNTFAFSILLLSKFFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3943; Mature: 3812
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTNFMNVLYKICALELLNTFAFSILLLSKFFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PKTNFMNVLYKICALELLNTFAFSILLLSKFFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA