Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528247

Identifier: 188528247

GI number: 188528247

Start: 1468414

End: 1468518

Strand: Direct

Name: 188528247

Synonym: HPSH_07565

Alternate gene names: NA

Gene position: 1468414-1468518 (Clockwise)

Preceding gene: 188528239

Following gene: 188528263

Centisome position: 91.29

GC content: 31.43

Gene sequence:

>105_bases
ATGCCTAAAACTAATTTCATGAATGTCCTTTATAAGATTTGCGCTTTAGAGCTGCTCAACACTTTTGCTTTCAGTATTTT
ATTGCTTTCTAAATTTTTCGCTTGA

Upstream 100 bases:

>100_bases
CACGACATGCGCGTTTTTAGACGCCACGACAAAAACTTCAATTTCTTTGGGTAATTTTTCTAAAAACCGCAAGGCTAGGG
GTATCCCGCTCGCCCCACTG

Downstream 100 bases:

>100_bases
ATGATTTGATTGAGCGCGCCATTTTCTAGGGCTTTTAGGCTTATTTCTATGCTGATTTGCCCCTCTTCATACACCCCGGT
GATAATGTCGTTTTTACGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 34; Mature: 33

Protein sequence:

>34_residues
MPKTNFMNVLYKICALELLNTFAFSILLLSKFFA

Sequences:

>Translated_34_residues
MPKTNFMNVLYKICALELLNTFAFSILLLSKFFA
>Mature_33_residues
PKTNFMNVLYKICALELLNTFAFSILLLSKFFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3943; Mature: 3812

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTNFMNVLYKICALELLNTFAFSILLLSKFFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PKTNFMNVLYKICALELLNTFAFSILLLSKFFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA