Click here to switch to the map view.

The map label for this gene is 188528239

Identifier: 188528239

GI number: 188528239

Start: 1457581

End: 1458276

Strand: Direct

Name: 188528239

Synonym: HPSH_07515

Alternate gene names: NA

Gene position: 1457581-1458276 (Clockwise)

Preceding gene: 188528232

Following gene: 188528247

Centisome position: 90.61

GC content: 39.51

Gene sequence:

>696_bases
ATGTTTAAAAAAATCATTTTTTTTTGTGTTTTCTTAATGGGGGGTTTTGTTGTCTTTCCCCTTGATGCAATGCCTATTTT
GCACGATAAAACCCCTAAAAAAAATTACCAAGAAGCCCATGAAAAGCTCTATAGAAGCATCATTAACCGCCAAAAGCTCA
CTCGTAAAAAAAGCGGGTGGTATTTTTTAGGAGGGTTTGGCGCTGTAGAAGCCATTAAGGACTATCAAGGCCAAGAAATG
AAAGATTGGATTGCAACGCTTGATTTAAAAACCGGCGTGCAAAGTTTTTTTAAAAAATATATCGGGATTAGGGGGGTTTT
TGCATGGGATCTTGGGTCAGGAAAAGTGAATTACCAAAGCCATAAAGATCCTACAAACTCTTTTTTTACCATGCTTGCGG
TGGGTTTGGATGTCATTATGGAATTTCCTTTAGGGAGTTACAAGCATTATTTGGGGGCGTTTGGGGGAGCTAGGGGGGCT
TTAGTCGCTTATACAGACAAGCAGAATTTCAAGTTTTTTAAACATTCTGTGGTTTCAGGGGGATTAGCGATTAATGGGGG
GGTCATGCTCACGCTTTTTTTAAGACACCGCATTGAATTAGGGTTTAAAATCTTACCCACCGCCAGATTGCTTTCTAGCT
CCAAACGCTTTGAGACTTCACCCTTATTTTATGCGGCATACAGCTATAAATTTTAA

Upstream 100 bases:

>100_bases
TATTAACAAAATTTTGTTTGTTAAAGCGACTATTTTAACACAATGATAAAACAAAAAGTTAAACGATATTCTATTTGATA
AAGGATTGATTATTTTTAAA

Downstream 100 bases:

>100_bases
CCTTTTAGCAAACTTCAAAAATCCAATCTTTAGGGGCTTCTTGTTCGCCTTGTTGGATGGATAAAAGCAAATCATAGAGT
TGTTTAGTGGTGTTGCCCGG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MFKKIIFFCVFLMGGFVVFPLDAMPILHDKTPKKNYQEAHEKLYRSIINRQKLTRKKSGWYFLGGFGAVEAIKDYQGQEM
KDWIATLDLKTGVQSFFKKYIGIRGVFAWDLGSGKVNYQSHKDPTNSFFTMLAVGLDVIMEFPLGSYKHYLGAFGGARGA
LVAYTDKQNFKFFKHSVVSGGLAINGGVMLTLFLRHRIELGFKILPTARLLSSSKRFETSPLFYAAYSYKF

Sequences:

>Translated_231_residues
MFKKIIFFCVFLMGGFVVFPLDAMPILHDKTPKKNYQEAHEKLYRSIINRQKLTRKKSGWYFLGGFGAVEAIKDYQGQEM
KDWIATLDLKTGVQSFFKKYIGIRGVFAWDLGSGKVNYQSHKDPTNSFFTMLAVGLDVIMEFPLGSYKHYLGAFGGARGA
LVAYTDKQNFKFFKHSVVSGGLAINGGVMLTLFLRHRIELGFKILPTARLLSSSKRFETSPLFYAAYSYKF
>Mature_231_residues
MFKKIIFFCVFLMGGFVVFPLDAMPILHDKTPKKNYQEAHEKLYRSIINRQKLTRKKSGWYFLGGFGAVEAIKDYQGQEM
KDWIATLDLKTGVQSFFKKYIGIRGVFAWDLGSGKVNYQSHKDPTNSFFTMLAVGLDVIMEFPLGSYKHYLGAFGGARGA
LVAYTDKQNFKFFKHSVVSGGLAINGGVMLTLFLRHRIELGFKILPTARLLSSSKRFETSPLFYAAYSYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26290; Mature: 26290

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKIIFFCVFLMGGFVVFPLDAMPILHDKTPKKNYQEAHEKLYRSIINRQKLTRKKSGW
CHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YFLGGFGAVEAIKDYQGQEMKDWIATLDLKTGVQSFFKKYIGIRGVFAWDLGSGKVNYQS
EEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCC
HKDPTNSFFTMLAVGLDVIMEFPLGSYKHYLGAFGGARGALVAYTDKQNFKFFKHSVVSG
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCC
GLAINGGVMLTLFLRHRIELGFKILPTARLLSSSKRFETSPLFYAAYSYKF
CEEECCHHHHHHHHHHHHHCCEEECCHHHHHHCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MFKKIIFFCVFLMGGFVVFPLDAMPILHDKTPKKNYQEAHEKLYRSIINRQKLTRKKSGW
CHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YFLGGFGAVEAIKDYQGQEMKDWIATLDLKTGVQSFFKKYIGIRGVFAWDLGSGKVNYQS
EEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCCC
HKDPTNSFFTMLAVGLDVIMEFPLGSYKHYLGAFGGARGALVAYTDKQNFKFFKHSVVSG
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCC
GLAINGGVMLTLFLRHRIELGFKILPTARLLSSSKRFETSPLFYAAYSYKF
CEEECCHHHHHHHHHHHHHCCEEECCHHHHHHCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA