Click here to switch to the map view.

The map label for this gene is 188528263

Identifier: 188528263

GI number: 188528263

Start: 1485725

End: 1485994

Strand: Direct

Name: 188528263

Synonym: HPSH_07645

Alternate gene names: NA

Gene position: 1485725-1485994 (Clockwise)

Preceding gene: 188528247

Following gene: 188528264

Centisome position: 92.36

GC content: 37.78

Gene sequence:

>270_bases
ATGATAGAATTTAGCGATGAAGATTTACAAAAACCGGTGCGTATTGTGATAGAAAAAATCCGCCCCTACTTGCTCAAAGA
TGGCGGTAATATTGAAGTGTTAGGGGTGAAAAGCATGAAAATTTATGTGGCTTTAGAGGGAGCGTGTAAAACTTGCTCTA
GCAGTAAAATCACTTTAAAAAATGTCATTGAAAGGCAGCTTAAAACGGATATTCACCCCAATTTAGAAGTGGTGTGCTTA
GAAAACGCTAAGGAGTTTCACGAGCTTTAA

Upstream 100 bases:

>100_bases
ATCCAATTAGCCCTTGAGCCACTCTTAAAAAGCGTTGTTTGATAAAAATGGCTCATTATATGGTATCTTAAAGTAAAATT
TTAAAAGAGAGTTTTAAAAA

Downstream 100 bases:

>100_bases
GGATTATTAGGCATGCAGAAGTTTGATTATGAATTTAAAAAGCGCGCGTTGGTTAAAGAGGGATTTTTAGCGTTCAAACA
AGCCCATTACGCTGAAGCGT

Product: conserved hypothetical nifU-like protein

Products: NA

Alternate protein names: Nitrogen-Fixing NifU Domain-Containing Protein; NifU-Like Protein; NifU Protein Homolog; Nitrogen-Fixing NifU Domain Protein; Nifu-Like Protein; Nitrogen-Fixing NifU-Like Protein; Nitrogen-Fixing Nifu Domain Protein

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLKTDIHPNLEVVCL
ENAKEFHEL

Sequences:

>Translated_89_residues
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLKTDIHPNLEVVCL
ENAKEFHEL
>Mature_89_residues
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLKTDIHPNLEVVCL
ENAKEFHEL

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10114; Mature: 10114

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK
CCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHH
NVIERQLKTDIHPNLEVVCLENAKEFHEL
HHHHHHHHCCCCCCEEEEEECCCHHHHCC
>Mature Secondary Structure
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK
CCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCEEEEEEECCCCCCCCCCCCHHH
NVIERQLKTDIHPNLEVVCLENAKEFHEL
HHHHHHHHCCCCCCEEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA