Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527911

Identifier: 188527911

GI number: 188527911

Start: 1144394

End: 1145206

Strand: Reverse

Name: 188527911

Synonym: HPSH_05810

Alternate gene names: NA

Gene position: 1145206-1144394 (Counterclockwise)

Preceding gene: 188527912

Following gene: 188527910

Centisome position: 71.2

GC content: 34.32

Gene sequence:

>813_bases
ATGAGTAGGAGTGCGATCTTTGTTGTTTCTGGCTTTTTAGCGTTCTTGCTCTATGCTTTGTTATTGTATGGTTTGTTATT
AGAAAGGCACAATGAAGAAGCGGAGAAAATTCTTTTGGATTTGGGCAAAAAAAACGAACAAGTCATTGATTTGAATTTAG
AAGATTTGCCAAGCGATGAAAAAAAAGAAGAAAAAGTAGAAGAAAAAAAAGAAGAAAAAGTAGTTGAAAAAAATGCAACT
GATAAGGAGGGCGATTTTATTGATCCTAAAGAACAAGAAGAAAGCCTTGAAAATATTTTTTCTTCACTCAATGATTTTCA
AGAAAAGACAGACACAAACGCTCAAAAAGATGAGCAAAAAAATGAACAAGAAGAAGAGCAAAGGCGTTTAAAAGAGCAGC
AACGCTTGAGAAAAAACCAAAAAAATCAAGAGATGTTGAAAGGTTTGCAACAGAATTTGGATCAATTCGCGCAAAAACTA
GAAAGCGTTAAAAACAAGACTTTAGATTTGCAAATCCCTAAACAAGATGGGGTTGATGAAAAAGCCTATCAAGAGTGGTA
TGCTCAAATCTATCAGATTTTATATAAAGGTTGGAAAGGGGTTTTTTACCACAAGGCTTCAGTGAGCGCGCTGATTATGA
TCACTAAAGATGGAGGGTTTGATTATACCATTCTTAGCTACTCCGATTTTAAGGATTATAACAAGAGCGTGATAACCCTT
TTAGATGATTTAAAGAAAGTGGATTTCCCCCCATATCCTGGAGGAAACATGATTTCTATTAAAGTTAATTTCACCACTAA
GGAAGAACAATGA

Upstream 100 bases:

>100_bases
GACTTATGACAAAGTGATTTATTTGTTAAAAACGATTAAAGAAGCGGGTTTTTTAAAAGTTTCTTTAATCACAAGTCCTT
AAAAAGTAGGGCTAATTTGC

Downstream 100 bases:

>100_bases
GGTATTTATGGCTTTTTTTAATATGCACTATAGGGCTTTTTGCAACAGATAAAACACTAGATATTATTAAAACCATTCAA
AAACTTCCTAAGATTGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSRSAIFVVSGFLAFLLYALLLYGLLLERHNEEAEKILLDLGKKNEQVIDLNLEDLPSDEKKEEKVEEKKEEKVVEKNAT
DKEGDFIDPKEQEESLENIFSSLNDFQEKTDTNAQKDEQKNEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLDQFAQKL
ESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWKGVFYHKASVSALIMITKDGGFDYTILSYSDFKDYNKSVITL
LDDLKKVDFPPYPGGNMISIKVNFTTKEEQ

Sequences:

>Translated_270_residues
MSRSAIFVVSGFLAFLLYALLLYGLLLERHNEEAEKILLDLGKKNEQVIDLNLEDLPSDEKKEEKVEEKKEEKVVEKNAT
DKEGDFIDPKEQEESLENIFSSLNDFQEKTDTNAQKDEQKNEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLDQFAQKL
ESVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWKGVFYHKASVSALIMITKDGGFDYTILSYSDFKDYNKSVITL
LDDLKKVDFPPYPGGNMISIKVNFTTKEEQ
>Mature_269_residues
SRSAIFVVSGFLAFLLYALLLYGLLLERHNEEAEKILLDLGKKNEQVIDLNLEDLPSDEKKEEKVEEKKEEKVVEKNATD
KEGDFIDPKEQEESLENIFSSLNDFQEKTDTNAQKDEQKNEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLDQFAQKLE
SVKNKTLDLQIPKQDGVDEKAYQEWYAQIYQILYKGWKGVFYHKASVSALIMITKDGGFDYTILSYSDFKDYNKSVITLL
DDLKKVDFPPYPGGNMISIKVNFTTKEEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31556; Mature: 31425

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSAIFVVSGFLAFLLYALLLYGLLLERHNEEAEKILLDLGKKNEQVIDLNLEDLPSDE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHCCCCH
KKEEKVEEKKEEKVVEKNATDKEGDFIDPKEQEESLENIFSSLNDFQEKTDTNAQKDEQK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLDQFAQKLESVKNKTLDLQIPKQDGVDE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH
KAYQEWYAQIYQILYKGWKGVFYHKASVSALIMITKDGGFDYTILSYSDFKDYNKSVITL
HHHHHHHHHHHHHHHHHCCHHEEEECCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHH
LDDLKKVDFPPYPGGNMISIKVNFTTKEEQ
HHHHHHCCCCCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
SRSAIFVVSGFLAFLLYALLLYGLLLERHNEEAEKILLDLGKKNEQVIDLNLEDLPSDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHCCCCH
KKEEKVEEKKEEKVVEKNATDKEGDFIDPKEQEESLENIFSSLNDFQEKTDTNAQKDEQK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NEQEEEQRRLKEQQRLRKNQKNQEMLKGLQQNLDQFAQKLESVKNKTLDLQIPKQDGVDE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH
KAYQEWYAQIYQILYKGWKGVFYHKASVSALIMITKDGGFDYTILSYSDFKDYNKSVITL
HHHHHHHHHHHHHHHHHCCHHEEEECCCEEEEEEEECCCCCEEEEECHHHHHHHHHHHHH
LDDLKKVDFPPYPGGNMISIKVNFTTKEEQ
HHHHHHCCCCCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA