| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is ggt [H]
Identifier: 188527900
GI number: 188527900
Start: 1135096
End: 1136799
Strand: Reverse
Name: ggt [H]
Synonym: HPSH_05755
Alternate gene names: 188527900
Gene position: 1136799-1135096 (Counterclockwise)
Preceding gene: 188527901
Following gene: 188527899
Centisome position: 70.67
GC content: 43.19
Gene sequence:
>1704_bases ATGAGACGGAGTTTTTTGAAAACGATTGGCTTGGGTGTGATAGCGCTCTCTTTGGGTTTGTTAAGCCCTTTGAGTGCAGC GAGTTACCCCCCCATTAAAAACACTAAAGTAGGCTTAGCCCTTTCTAGCCACCCGCTAGCTAGTGAGATCGGGCAAAAGG TTTTAGAAGATGGAGGTAATGCGATTGATGCGGCTGTAGCGATAGGTTTTGCTCTAGCGGTCGTCCATCCTGCAGCAGGC AATATTGGTGGTGGGGGTTTTGCGGTTATCCATTTGGCTAATGGTGAAAATGTTGCCTTAGATTTTAGAGAAAAAGCCCC CTTAAAAGCCACTAAGGACATGTTTTTAGACAAGCAAGGCAATGTAGTCCCTAAGCTCAGCGAAGATGGCTATTTGGCGG CTGGGGTTCCTGGAACGGTGGCGGGCATGGAAGCGATGTTGAAGAAATACGGCACAAAAAAGCTATCGCAACTCATTGAT CCTGCCATTAAATTGGCTGAAAATGGTTATGTGATTTCACAAAGACAAGCAGAAACCCTAAAAGAAGCAAGGGAGCGGTT TTTAAAATACAGTTCTAGCAAAAAGTATTTTTTTAAAAAAGGGCATCTTGATTATCAAGAAGGGGATTTGTTTGTCCAAA AAGATTTAGCCAAGACTTTGAATCAAATCAAAACGCTAGGCGCTAAAGGCTTTTATCAAGGGCAAGTCGCTGATTTGATT GAGAAAGACATGAAAAAAAATGGAGGGATTATCACTAAAGAAGATTTAGCCAGTTACAATGTGAAATGGCGCAAACCCGT GGTAGGGAGTTATCGTGGGTATAAGATCATTTCTATGTCGCCGCCAAGTTCAGGAGGCACGCATTTGATCCAGATTTTAA ATGTCATGGAAAATGCGGATTTAAGTGCCCTTGGGTATGGGGCTTCTAAGAATATCCATATCGCTGCAGAAGCGATGCGT CAAGCTTATGCGGACAGATCGGTTTATATGGGAGACGCTGATTTTGTTTCAGTGCCGGTGGATAAATTGATTAATAAGGC GTATGCCAAAAAGATTTTTGACGCTATCCAGCCAGATACGGTTACGCCAAGCTCTCAAATCAAACCAGGAATGGGGCAGT TGCATGAAGGGAGCAATACCACGCATTATTCTGTAGCGGACAGGTGGGGGAATGCAGTCAGCGTTACTTACACCATTAAC GCTTCTTATGGAAGCGCTGCTAGTATTGATGGGGCAGGATTTTTATTGAACAATGAAATGGATGATTTTTCCATAAAGCC TGGGAATCCTAATCTCTATGGTTTAGTAGGGGGCGATGCGAATGCGATTGAAGCCAATAAGCGCCCTTTAAGCTCCATGT CGCCTACGATCGTGTTGAAAAACAATAAGGTTTTCATGGTGGTAGGAAGCCCTGGAGGGTCTAGGATTATCACTACAGTG TTGCAAGTGATTTCCAATGTCATTGATTACAACATGAATATTTCTGAAGCGGTCTCAGCCCCTAGATTCCACATGCAATG GTTGCCTGATGAATTAAGGATTGAAAAGTTTGGCATGCCTGCTGATGTGAAAAATAACCTCACTAAAATGGGCTATCAAA TCGTTACTAAGCCAGTCATGGGTGATGTGAATGCGATCCAAGTTTTGCCTAAAACTAAAGGGAGCGTTTTCTATGGATCA ACGGATCCAAGGAAAGAATTTTAA
Upstream 100 bases:
>100_bases CAAACGATAATGGCTAATAGCATCATATAACTATAAGCGAGAGGGTGCTTTGTAAAGCTTATGCTATAATAACGATTATT GTTGATTGAAAGGAAAACAG
Downstream 100 bases:
>100_bases TTCTTTGTCATATGCGGGTTTTTAATCCTATTTAGCCTTATTTTTTGGGATGGAGGGGGGATTTTTTAGCGAGAAAATCT TAAATTTAGTTTTAAATTCA
Product: gamma-glutamyltranspeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MRRSFLKTIGLGVIALSLGLLSPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEDGGNAIDAAVAIGFALAVVHPAAG NIGGGGFAVIHLANGENVALDFREKAPLKATKDMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLID PAIKLAENGYVISQRQAETLKEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVADLI EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMR QAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDAIQPDTVTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTIN ASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFMVVGSPGGSRIITTV LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKNNLTKMGYQIVTKPVMGDVNAIQVLPKTKGSVFYGS TDPRKEF
Sequences:
>Translated_567_residues MRRSFLKTIGLGVIALSLGLLSPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEDGGNAIDAAVAIGFALAVVHPAAG NIGGGGFAVIHLANGENVALDFREKAPLKATKDMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLID PAIKLAENGYVISQRQAETLKEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVADLI EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMR QAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDAIQPDTVTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTIN ASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFMVVGSPGGSRIITTV LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKNNLTKMGYQIVTKPVMGDVNAIQVLPKTKGSVFYGS TDPRKEF >Mature_567_residues MRRSFLKTIGLGVIALSLGLLSPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEDGGNAIDAAVAIGFALAVVHPAAG NIGGGGFAVIHLANGENVALDFREKAPLKATKDMFLDKQGNVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLID PAIKLAENGYVISQRQAETLKEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVADLI EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMR QAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDAIQPDTVTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTIN ASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFMVVGSPGGSRIITTV LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKNNLTKMGYQIVTKPVMGDVNAIQVLPKTKGSVFYGS TDPRKEF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=479, Percent_Identity=32.776617954071, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI73915090, Length=479, Percent_Identity=32.776617954071, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI73915096, Length=479, Percent_Identity=32.776617954071, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI73915094, Length=479, Percent_Identity=32.776617954071, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI113429324, Length=477, Percent_Identity=31.2368972746331, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI113429326, Length=481, Percent_Identity=30.7692307692308, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI109148539, Length=473, Percent_Identity=28.7526427061311, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI153266885, Length=552, Percent_Identity=25.5434782608696, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI153266901, Length=553, Percent_Identity=25.8589511754069, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI153266907, Length=551, Percent_Identity=24.8638838475499, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI30581157, Length=176, Percent_Identity=38.6363636363636, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI30581155, Length=176, Percent_Identity=38.6363636363636, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI218505805, Length=174, Percent_Identity=34.4827586206897, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI310124095, Length=174, Percent_Identity=31.0344827586207, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1789856, Length=537, Percent_Identity=52.3277467411546, Blast_Score=558, Evalue=1e-160, Organism=Caenorhabditis elegans, GI212646519, Length=511, Percent_Identity=35.4207436399217, Blast_Score=252, Evalue=3e-67, Organism=Caenorhabditis elegans, GI72000294, Length=511, Percent_Identity=35.4207436399217, Blast_Score=252, Evalue=5e-67, Organism=Caenorhabditis elegans, GI17506189, Length=609, Percent_Identity=30.8702791461412, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI193208247, Length=551, Percent_Identity=33.0308529945554, Blast_Score=221, Evalue=8e-58, Organism=Caenorhabditis elegans, GI193208245, Length=558, Percent_Identity=33.1541218637993, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17542894, Length=493, Percent_Identity=32.8600405679513, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI72001497, Length=227, Percent_Identity=31.7180616740088, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI72001495, Length=227, Percent_Identity=31.7180616740088, Blast_Score=108, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17564448, Length=437, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6323330, Length=523, Percent_Identity=31.3575525812619, Blast_Score=186, Evalue=8e-48, Organism=Drosophila melanogaster, GI161077496, Length=529, Percent_Identity=33.2703213610586, Blast_Score=232, Evalue=7e-61, Organism=Drosophila melanogaster, GI18859893, Length=555, Percent_Identity=31.7117117117117, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI45551474, Length=542, Percent_Identity=30.2583025830258, Blast_Score=211, Evalue=8e-55, Organism=Drosophila melanogaster, GI161077880, Length=542, Percent_Identity=30.2583025830258, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI161077878, Length=542, Percent_Identity=30.2583025830258, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24642670, Length=542, Percent_Identity=30.2583025830258, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24642666, Length=542, Percent_Identity=30.2583025830258, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI18859741, Length=531, Percent_Identity=28.060263653484, Blast_Score=164, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 61053; Mature: 61053
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00462 G_GLU_TRANSPEPTIDASE ; PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSFLKTIGLGVIALSLGLLSPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEDGGN CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC AIDAAVAIGFALAVVHPAAGNIGGGGFAVIHLANGENVALDFREKAPLKATKDMFLDKQG HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHCCCCC NVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYVISQRQAETL CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEHHHHHHH KEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVADLI HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHH EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENAD HHHHHHCCCEEEHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC LSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDAIQPDT CCEECCCCCCCEEHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCC VTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEM CCCHHCCCCCCCCCCCCCCCEEEEHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEECCCC DDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFMVVGSPGGSRIITTV CCCEECCCCCCEEEEECCCCCEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHH LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKNNLTKMGYQIVTKPVM HHHHHHHHHCCCCHHHHHCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHEECCCC GDVNAIQVLPKTKGSVFYGSTDPRKEF CCCCEEEEEECCCCCEEECCCCCCCCC >Mature Secondary Structure MRRSFLKTIGLGVIALSLGLLSPLSAASYPPIKNTKVGLALSSHPLASEIGQKVLEDGGN CCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCC AIDAAVAIGFALAVVHPAAGNIGGGGFAVIHLANGENVALDFREKAPLKATKDMFLDKQG HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHCCCCC NVVPKLSEDGYLAAGVPGTVAGMEAMLKKYGTKKLSQLIDPAIKLAENGYVISQRQAETL CCCCCCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEEEHHHHHHH KEARERFLKYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVADLI HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHH EKDMKKNGGIITKEDLASYNVKWRKPVVGSYRGYKIISMSPPSSGGTHLIQILNVMENAD HHHHHHCCCEEEHHHHHCCCCEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC LSALGYGASKNIHIAAEAMRQAYADRSVYMGDADFVSVPVDKLINKAYAKKIFDAIQPDT CCEECCCCCCCEEHHHHHHHHHHCCCCEEECCCCEEECCHHHHHHHHHHHHHHHHCCCCC VTPSSQIKPGMGQLHEGSNTTHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEM CCCHHCCCCCCCCCCCCCCCEEEEHHHHCCCEEEEEEEEECCCCCCCCCCCCEEEECCCC DDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVLKNNKVFMVVGSPGGSRIITTV CCCEECCCCCCEEEEECCCCCEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHH LQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKNNLTKMGYQIVTKPVM HHHHHHHHHCCCCHHHHHCCCCCEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHEECCCC GDVNAIQVLPKTKGSVFYGSTDPRKEF CCCCEEEEEECCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2570061; 9278503; 8041620; 1360205 [H]