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The map label for this gene is dcd

Identifier: 188527863

GI number: 188527863

Start: 1098049

End: 1098615

Strand: Reverse

Name: dcd

Synonym: HPSH_05555

Alternate gene names: 188527863

Gene position: 1098615-1098049 (Counterclockwise)

Preceding gene: 188527874

Following gene: 188527862

Centisome position: 68.3

GC content: 41.45

Gene sequence:

>567_bases
ATGGGATTGAAAGCGGATTCTTGGATTAAAAAAATGAGTTTAGAGCATGGCATGATTAGCCCTTTTTGCGAAAAGCAAAT
CGGTAAGGATGTGATCAGCTATGGTTTGAGCAGTTATGGGTATGATATTAGAGTGGGGAGCGAGTTCATGCTCTTTGATA
ACAAGAACGCTTTAATTGACCCTAAAAACTTTGACCCCAACAACACGACTAAAATTGATGCGAGCAAGGAGGGTTTTTTT
ATCTTACCCGCTAACGCGTTCGCTCTAGCCCATACGATAGAGTATTTTAAAATGCCTAAAGACACCTTAGCGATTTGTTT
GGGCAAAAGCACTTATGCTAGGTGCGGGATTATTGTGAATGTTACGCCTTTTGAGCCGGAATTTGAAGGCTATATCACGA
TTGAAATTTCTAACACCACTAATCTGCCGGCTAAAGTTTATGCCAATGAGGGGATCGCGCAAGTGGTGTTTTTGCAAGGC
GATGAAGTGTGTGAGCAAAGCTATAAAGATAGAGGCGGTAAGTATCAAGGGCAAGTGGGCATCACTTTGCCTAAAATTTT
AAAGTGA

Upstream 100 bases:

>100_bases
TATGCCACAAACACATAATCTTACTAACCATAAGCGTTTTTAGCAAAAAATTATTGTTATAATAACATAATTATTAACAA
ACTTTAAAGGCTTTGTGCGT

Downstream 100 bases:

>100_bases
TTTGAAGGAAGATAAAAGCGCTTATTCTTTGAGCGTTGTTTATTTTTTAATACAAACAATACCGCAATTTCTCAAAAATG
TATTATAATACGAAACTTCA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MGLKADSWIKKMSLEHGMISPFCEKQIGKDVISYGLSSYGYDIRVGSEFMLFDNKNALIDPKNFDPNNTTKIDASKEGFF
ILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFLQG
DEVCEQSYKDRGGKYQGQVGITLPKILK

Sequences:

>Translated_188_residues
MGLKADSWIKKMSLEHGMISPFCEKQIGKDVISYGLSSYGYDIRVGSEFMLFDNKNALIDPKNFDPNNTTKIDASKEGFF
ILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFLQG
DEVCEQSYKDRGGKYQGQVGITLPKILK
>Mature_187_residues
GLKADSWIKKMSLEHGMISPFCEKQIGKDVISYGLSSYGYDIRVGSEFMLFDNKNALIDPKNFDPNNTTKIDASKEGFFI
LPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVNVTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFLQGD
EVCEQSYKDRGGKYQGQVGITLPKILK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 20901; Mature: 20770

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKADSWIKKMSLEHGMISPFCEKQIGKDVISYGLSSYGYDIRVGSEFMLFDNKNALID
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCEEC
PKNFDPNNTTKIDASKEGFFILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVN
CCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCHHHCEEEEE
VTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFLQGDEVCEQSYKDRGGKYQGQVG
ECCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHHCCCEECCEEC
ITLPKILK
CCCHHHCC
>Mature Secondary Structure 
GLKADSWIKKMSLEHGMISPFCEKQIGKDVISYGLSSYGYDIRVGSEFMLFDNKNALID
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEECCCCEEC
PKNFDPNNTTKIDASKEGFFILPANAFALAHTIEYFKMPKDTLAICLGKSTYARCGIIVN
CCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCHHHCEEEEE
VTPFEPEFEGYITIEISNTTNLPAKVYANEGIAQVVFLQGDEVCEQSYKDRGGKYQGQVG
ECCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEEECCHHHHHHHHHHCCCEECCEEC
ITLPKILK
CCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA