| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527811
Identifier: 188527811
GI number: 188527811
Start: 1036094
End: 1036360
Strand: Reverse
Name: 188527811
Synonym: HPSH_05255
Alternate gene names: NA
Gene position: 1036360-1036094 (Counterclockwise)
Preceding gene: 188527815
Following gene: 188527810
Centisome position: 64.43
GC content: 27.34
Gene sequence:
>267_bases TTGCATGTCTATAATTACATTTCGTTTTTAAAGACAAGCTTTAAAAAGTTCTTTAATTTGAAACAACTCAAACGAGTCAT AAAAGCCAAAAAGCTTTTAAACAAGTTAAGTTATAAAGCCAAAAAGCTTTTGAATATAAAAAGCTCATTAGCTGATAAAA CTTGGCAATTAAAAAAGATTAGGGATCAAGCATTTTTAGTCTTCTTTAAGGGGTTTAACATCAAGAGCGATTATAGCAAG TTTTTAAAGAAAAACGAAGTTATTTGA
Upstream 100 bases:
>100_bases TTTAATTTAAAGCTTTTTATTCCTAACCCCTTCCAAATCATTTCCAATCGCTTTTATCCATTTCTTTCAAATTCTAAAAA CTTTAAGCAAACTTTAAGCA
Downstream 100 bases:
>100_bases TTTAACATTGTTAATAGCCTATGTAAAAGTAAAGTAAAACTACAATAACTCTGTCTTATATTCATTAAGGCAGTGGTAGC GCTGAAGAATATTCGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MHVYNYISFLKTSFKKFFNLKQLKRVIKAKKLLNKLSYKAKKLLNIKSSLADKTWQLKKIRDQAFLVFFKGFNIKSDYSK FLKKNEVI
Sequences:
>Translated_88_residues MHVYNYISFLKTSFKKFFNLKQLKRVIKAKKLLNKLSYKAKKLLNIKSSLADKTWQLKKIRDQAFLVFFKGFNIKSDYSK FLKKNEVI >Mature_88_residues MHVYNYISFLKTSFKKFFNLKQLKRVIKAKKLLNKLSYKAKKLLNIKSSLADKTWQLKKIRDQAFLVFFKGFNIKSDYSK FLKKNEVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10584; Mature: 10584
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVYNYISFLKTSFKKFFNLKQLKRVIKAKKLLNKLSYKAKKLLNIKSSLADKTWQLKKI CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDQAFLVFFKGFNIKSDYSKFLKKNEVI HHHHHHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MHVYNYISFLKTSFKKFFNLKQLKRVIKAKKLLNKLSYKAKKLLNIKSSLADKTWQLKKI CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDQAFLVFFKGFNIKSDYSKFLKKNEVI HHHHHHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA