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The map label for this gene is gatC

Identifier: 188527794

GI number: 188527794

Start: 1018765

End: 1019046

Strand: Direct

Name: gatC

Synonym: HPSH_05150

Alternate gene names: 188527794

Gene position: 1018765-1019046 (Clockwise)

Preceding gene: 188527793

Following gene: 188527796

Centisome position: 63.33

GC content: 40.78

Gene sequence:

>282_bases
ATGCAAATTGATGACGCATTATTGCAACGCTTGGAAAAATTGAGCATGCTAGAGATTAAAGATGAGCATAAAGAGAGCGT
TAAAGGCCATTTAGCCGAGGTTTTAGGCTTTGTGGAAAACATTTTCGCTTTAGAAACCAGCGCGCTAAAAACAGATACAA
AGCTATGCACCCCCTTAAGAGAAGATGAGCCCAAAAGCCAACCCCACATTGCCAAAGAGATTTTAAGCCAAAACAAGCAC
AGCCAGGATCATTACTTCGTTGTGCCTAAAATCATTGAATAG

Upstream 100 bases:

>100_bases
ACGGAGCGCTAAACAATATCGCTAGCAGCGTGTTAAAACTCATGGGCCTTAAAGCCCCAGCAACGATGGACGAACCCCTA
TTTTAAACTAAAGGAAGAGA

Downstream 100 bases:

>100_bases
GTTTCATTGAATAGGTTTCATATCAAGTTAAAAACTTGATTTTTGAAATCAAACAGACAGAAAAAAACGCTTTCAGCCTT
TTTTTAACCCATCAAGAATT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MQIDDALLQRLEKLSMLEIKDEHKESVKGHLAEVLGFVENIFALETSALKTDTKLCTPLREDEPKSQPHIAKEILSQNKH
SQDHYFVVPKIIE

Sequences:

>Translated_93_residues
MQIDDALLQRLEKLSMLEIKDEHKESVKGHLAEVLGFVENIFALETSALKTDTKLCTPLREDEPKSQPHIAKEILSQNKH
SQDHYFVVPKIIE
>Mature_93_residues
MQIDDALLQRLEKLSMLEIKDEHKESVKGHLAEVLGFVENIFALETSALKTDTKLCTPLREDEPKSQPHIAKEILSQNKH
SQDHYFVVPKIIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 10678; Mature: 10678

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDDALLQRLEKLSMLEIKDEHKESVKGHLAEVLGFVENIFALETSALKTDTKLCTPLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
EDEPKSQPHIAKEILSQNKHSQDHYFVVPKIIE
CCCCCCCCHHHHHHHHCCCCCCCCEEECCEECC
>Mature Secondary Structure
MQIDDALLQRLEKLSMLEIKDEHKESVKGHLAEVLGFVENIFALETSALKTDTKLCTPLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCC
EDEPKSQPHIAKEILSQNKHSQDHYFVVPKIIE
CCCCCCCCHHHHHHHHCCCCCCCCEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA