| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527747
Identifier: 188527747
GI number: 188527747
Start: 969478
End: 969684
Strand: Reverse
Name: 188527747
Synonym: HPSH_04870
Alternate gene names: NA
Gene position: 969684-969478 (Counterclockwise)
Preceding gene: 188527759
Following gene: 188527744
Centisome position: 60.28
GC content: 37.68
Gene sequence:
>207_bases ATGCCGTTTATCAATATCAAACTTGTGCCAGAAAATGGAGAGCCAACAAACGAGCAAAAACAGCAATTGATTGAAGGGGT TTCAGATTTGATGGTTAAGGTGTTAAACAAAAATAAGGCTTCTATTGTGGTCATTATAGATGAGGTGGATTCTAATAATT ATGGTCTTGGGGGCGAGAGCGTCCATCATTTGAGGCAAAAAAACTAA
Upstream 100 bases:
>100_bases GGCTTTTATTGTTTTTTAAAAGAGGGTTTAATATGAAAAGCGCTAATAAAGCGTTTAAATAAAAGCGCTACAATGCGTCA TCTCAAATTAAAGGAATACT
Downstream 100 bases:
>100_bases ATCTTTAAAATTCAAAGGTTGCGATAACATTTAAGGGGTGCTTATTTTCTAACCCCCTAAAAACTATAAACATAACTCAC ATTAAACACCACAAGGCGTT
Product: 4-oxalocrotonate tautomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPFINIKLVPENGEPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESVHHLRQKN
Sequences:
>Translated_68_residues MPFINIKLVPENGEPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESVHHLRQKN >Mature_67_residues PFINIKLVPENGEPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESVHHLRQKN
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR018191 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 7584; Mature: 7453
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFINIKLVPENGEPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGES CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH VHHLRQKN HHHHHCCC >Mature Secondary Structure PFINIKLVPENGEPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGES CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHH VHHLRQKN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]