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The map label for this gene is fliD

Identifier: 188527405

GI number: 188527405

Start: 585942

End: 587999

Strand: Reverse

Name: fliD

Synonym: HPSH_03070

Alternate gene names: 188527405

Gene position: 587999-585942 (Counterclockwise)

Preceding gene: 188527406

Following gene: 188527404

Centisome position: 36.55

GC content: 42.23

Gene sequence:

>2058_bases
ATGGCAATAGGTTCATTAAGCTCATTAGGGCTTGGCAGTAAGGTTTTGAATTACGATGTGATTGACAAGCTTAAGGACGC
CGATGAAAAAGCGTTAATCGCCCCCTTAGACAAGAAAATGGAGCAAAATGTTGAAAAACAAAAAGCCCTAGTAGAAATTA
AAACGCTCCTTTCATCTCTAAAAGGCCCGGTTAAAACGCTTTCGGATTATTCCACTTATATCAGCAGGAAAAGCAATGTT
ACAGGCGATGCGTTGAGCGCGAGTGTGGGGGCTGGCGTGCCTATTCAAGATATTAAAGTGGATGTGCAAAATTTAGCGCA
AGGCGATATTAACGAATTAGGGGCTAAATTTTCTTCAAGAGATGATATTTTTAGCCAAGTGGATACCACGCTCAAATTTT
ACACGCAAAACAAGGACTACGCCGTTGATATTAAAGCAGGAATGACTTTAGGCGATGTGGCTCAAAGCATTACAGATGCT
ACCAACGGCGAAGTGATGGGCATTGTGATGAAAACAGGAGGGAATGACCCCTACCAATTAATGGTGAATACCAAAAACAC
CGGTGAGGACAACCGCATCTATTTTGGCTCACACCTCCAATCCACGCTCACCAACAAAAACGCCCTTTCTTTGGGGGTTG
ATGGGAGCGGAAAAAGTGAAGCGAGTTTGAATTTAAAGGGGGCTGATGGGAGTATGCATGAAGTCCCCATCATGCTAGAA
CTCCCTGAAAGCGCTTCTATCAAACAAAAAAACACCGCAATCCAAAAAGCAATAGAGCAGGCTTTAGAAAATGACCCTAA
TTTTAAAGATTTGATCGCTAATGGGGATATTTCTATAGACACTCTTCATGGGGGGGAGTCTTTAATCATTAATGACAGGC
GTGGGGGAAACATTGAAGTTAAAGGGAGTAAGGCTAAAGAGCTTGGGTTTTTGCAAACCACCACCCAAGAAAGCGATTTA
TTGAAAAGCTCTCGCACCATCAAAGAGGGCAAATTAGAAGGGGTGGTTAGCTTGAATGGTCAAAGACTGGATTTGAGCGC
TTTAACCAAAGCGAGTAACACTAGTGAAGAAAACACAGACGCTATCATTCAAGCGATCAATTCCAAAGAAGGCTTGAATG
CGTTTAAGAACGCCGAAGGCAAGCTTGTGATCAATTCTAAAACCGGAATGCTAACGATTAAGGGAGAGGACGCTTTAGGC
AAGGCCAGTTTGAAGGATTTGGGTTTAAGTGCTGGCATGGTGCAATCTTATGAAGCTTCACAAAACACGCTTTTTATGTC
TAAAAATTTGCAAAAAGCGAGCGATTCAGCATTCACTTATAACGGGGTGAGCATCACACGCCCCACTAATGAGGTCAATG
ATGTGATCAGTGGGGTTAATATCACTTTAGAGCAAACCACAGAGCCTAATAAACCTGCCATTATCAGCGTGAGCAGGGAC
AATCAAGCCATTATAGACAGCCTTACTGAATTTGTCAAAGCCTATAATGAGCTTATCCCTAAACTGGATGAAGACACTCG
TTATGACGCTGACACTAAAATCGCTGGGATTTTTAACGGCGTGGGCGATATTCGCGCGATTCGTTCTTCTCTTAATAATG
TGTTTTCTTATAGCGTGCATACGGATAATGGGGTAGAAAGCTTGATGAAATACGGGCTTAGTTTGGACGATAAAGGCGTG
ATGAGTTTAGATGAGGCTAAATTGAGTAGTGCGCTAAATTCTAATCCTAAAGCGACTCAAGATTTTTTCTATGGGAGCGA
TAGCAAGGATATGGGGGGCAGAGAGATCCACCAAGAGGGCATTTTTTCTAAATTCAATCAAGTCATCGCCAATCTCATAG
ATGGAGGGAACGCTAAATTAAAGATTTATGAAGATTCCCTAGACAGAGACGCTAAAAGCTTAACCAAAGACAAAGAAAAC
GCTCAAGAGCTTTTAAAAACCCGCTACAACATCATGGCGGAACGCTTTGCGGCTTATGATAGCCAAATTTCTAAAGCCAA
TCAAAAATTCAATTCCGTGCAAATGATGATCGATCAAGCAGCGGCCAAAAAGAATTAA

Upstream 100 bases:

>100_bases
AGAGAGATACCCTCTAAAGAAGCCGTGGAGCTTATGCAAAGAATGCGCGATGTGATAGGCATTATCTTTGATAAAAAAGG
CTAAAAATTAGAGGTAAAAC

Downstream 100 bases:

>100_bases
AAAGAATTAAAAAAAGAGTTATCAATTTTAAAGGATAAAGGAACATTATGCAATACGCTAACGCTTATCAAGCCTACCAG
CATAACCGAGTGAGTGTGGA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 685; Mature: 684

Protein sequence:

>685_residues
MAIGSLSSLGLGSKVLNYDVIDKLKDADEKALIAPLDKKMEQNVEKQKALVEIKTLLSSLKGPVKTLSDYSTYISRKSNV
TGDALSASVGAGVPIQDIKVDVQNLAQGDINELGAKFSSRDDIFSQVDTTLKFYTQNKDYAVDIKAGMTLGDVAQSITDA
TNGEVMGIVMKTGGNDPYQLMVNTKNTGEDNRIYFGSHLQSTLTNKNALSLGVDGSGKSEASLNLKGADGSMHEVPIMLE
LPESASIKQKNTAIQKAIEQALENDPNFKDLIANGDISIDTLHGGESLIINDRRGGNIEVKGSKAKELGFLQTTTQESDL
LKSSRTIKEGKLEGVVSLNGQRLDLSALTKASNTSEENTDAIIQAINSKEGLNAFKNAEGKLVINSKTGMLTIKGEDALG
KASLKDLGLSAGMVQSYEASQNTLFMSKNLQKASDSAFTYNGVSITRPTNEVNDVISGVNITLEQTTEPNKPAIISVSRD
NQAIIDSLTEFVKAYNELIPKLDEDTRYDADTKIAGIFNGVGDIRAIRSSLNNVFSYSVHTDNGVESLMKYGLSLDDKGV
MSLDEAKLSSALNSNPKATQDFFYGSDSKDMGGREIHQEGIFSKFNQVIANLIDGGNAKLKIYEDSLDRDAKSLTKDKEN
AQELLKTRYNIMAERFAAYDSQISKANQKFNSVQMMIDQAAAKKN

Sequences:

>Translated_685_residues
MAIGSLSSLGLGSKVLNYDVIDKLKDADEKALIAPLDKKMEQNVEKQKALVEIKTLLSSLKGPVKTLSDYSTYISRKSNV
TGDALSASVGAGVPIQDIKVDVQNLAQGDINELGAKFSSRDDIFSQVDTTLKFYTQNKDYAVDIKAGMTLGDVAQSITDA
TNGEVMGIVMKTGGNDPYQLMVNTKNTGEDNRIYFGSHLQSTLTNKNALSLGVDGSGKSEASLNLKGADGSMHEVPIMLE
LPESASIKQKNTAIQKAIEQALENDPNFKDLIANGDISIDTLHGGESLIINDRRGGNIEVKGSKAKELGFLQTTTQESDL
LKSSRTIKEGKLEGVVSLNGQRLDLSALTKASNTSEENTDAIIQAINSKEGLNAFKNAEGKLVINSKTGMLTIKGEDALG
KASLKDLGLSAGMVQSYEASQNTLFMSKNLQKASDSAFTYNGVSITRPTNEVNDVISGVNITLEQTTEPNKPAIISVSRD
NQAIIDSLTEFVKAYNELIPKLDEDTRYDADTKIAGIFNGVGDIRAIRSSLNNVFSYSVHTDNGVESLMKYGLSLDDKGV
MSLDEAKLSSALNSNPKATQDFFYGSDSKDMGGREIHQEGIFSKFNQVIANLIDGGNAKLKIYEDSLDRDAKSLTKDKEN
AQELLKTRYNIMAERFAAYDSQISKANQKFNSVQMMIDQAAAKKN
>Mature_684_residues
AIGSLSSLGLGSKVLNYDVIDKLKDADEKALIAPLDKKMEQNVEKQKALVEIKTLLSSLKGPVKTLSDYSTYISRKSNVT
GDALSASVGAGVPIQDIKVDVQNLAQGDINELGAKFSSRDDIFSQVDTTLKFYTQNKDYAVDIKAGMTLGDVAQSITDAT
NGEVMGIVMKTGGNDPYQLMVNTKNTGEDNRIYFGSHLQSTLTNKNALSLGVDGSGKSEASLNLKGADGSMHEVPIMLEL
PESASIKQKNTAIQKAIEQALENDPNFKDLIANGDISIDTLHGGESLIINDRRGGNIEVKGSKAKELGFLQTTTQESDLL
KSSRTIKEGKLEGVVSLNGQRLDLSALTKASNTSEENTDAIIQAINSKEGLNAFKNAEGKLVINSKTGMLTIKGEDALGK
ASLKDLGLSAGMVQSYEASQNTLFMSKNLQKASDSAFTYNGVSITRPTNEVNDVISGVNITLEQTTEPNKPAIISVSRDN
QAIIDSLTEFVKAYNELIPKLDEDTRYDADTKIAGIFNGVGDIRAIRSSLNNVFSYSVHTDNGVESLMKYGLSLDDKGVM
SLDEAKLSSALNSNPKATQDFFYGSDSKDMGGREIHQEGIFSKFNQVIANLIDGGNAKLKIYEDSLDRDAKSLTKDKENA
QELLKTRYNIMAERFAAYDSQISKANQKFNSVQMMIDQAAAKKN

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 74049; Mature: 73918

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGSLSSLGLGSKVLNYDVIDKLKDADEKALIAPLDKKMEQNVEKQKALVEIKTLLSSL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
KGPVKTLSDYSTYISRKSNVTGDALSASVGAGVPIQDIKVDVQNLAQGDINELGAKFSSR
CCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCH
DDIFSQVDTTLKFYTQNKDYAVDIKAGMTLGDVAQSITDATNGEVMGIVMKTGGNDPYQL
HHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEE
MVNTKNTGEDNRIYFGSHLQSTLTNKNALSLGVDGSGKSEASLNLKGADGSMHEVPIMLE
EEECCCCCCCCEEEECCHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEEE
LPESASIKQKNTAIQKAIEQALENDPNFKDLIANGDISIDTLHGGESLIINDRRGGNIEV
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEE
KGSKAKELGFLQTTTQESDLLKSSRTIKEGKLEGVVSLNGQRLDLSALTKASNTSEENTD
CCCCHHHCCCEEECCCHHHHHHHHCCHHCCCCCEEEEECCCEEEHHHHHHCCCCCCCHHH
AIIQAINSKEGLNAFKNAEGKLVINSKTGMLTIKGEDALGKASLKDLGLSAGMVQSYEAS
HHHHHHCCCHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCHHHHHCCCCCCHHHHCCCC
QNTLFMSKNLQKASDSAFTYNGVSITRPTNEVNDVISGVNITLEQTTEPNKPAIISVSRD
CCEEEEECCCCCCCCCCEEECCEEEECCCHHHHHHHCCCEEEEECCCCCCCCEEEEECCC
NQAIIDSLTEFVKAYNELIPKLDEDTRYDADTKIAGIFNGVGDIRAIRSSLNNVFSYSVH
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHEEEEEE
TDNGVESLMKYGLSLDDKGVMSLDEAKLSSALNSNPKATQDFFYGSDSKDMGGREIHQEG
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHH
IFSKFNQVIANLIDGGNAKLKIYEDSLDRDAKSLTKDKENAQELLKTRYNIMAERFAAYD
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SQISKANQKFNSVQMMIDQAAAKKN
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIGSLSSLGLGSKVLNYDVIDKLKDADEKALIAPLDKKMEQNVEKQKALVEIKTLLSSL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
KGPVKTLSDYSTYISRKSNVTGDALSASVGAGVPIQDIKVDVQNLAQGDINELGAKFSSR
CCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCH
DDIFSQVDTTLKFYTQNKDYAVDIKAGMTLGDVAQSITDATNGEVMGIVMKTGGNDPYQL
HHHHHHHHHHEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEE
MVNTKNTGEDNRIYFGSHLQSTLTNKNALSLGVDGSGKSEASLNLKGADGSMHEVPIMLE
EEECCCCCCCCEEEECCHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCEEEEE
LPESASIKQKNTAIQKAIEQALENDPNFKDLIANGDISIDTLHGGESLIINDRRGGNIEV
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEE
KGSKAKELGFLQTTTQESDLLKSSRTIKEGKLEGVVSLNGQRLDLSALTKASNTSEENTD
CCCCHHHCCCEEECCCHHHHHHHHCCHHCCCCCEEEEECCCEEEHHHHHHCCCCCCCHHH
AIIQAINSKEGLNAFKNAEGKLVINSKTGMLTIKGEDALGKASLKDLGLSAGMVQSYEAS
HHHHHHCCCHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCHHHHHCCCCCCHHHHCCCC
QNTLFMSKNLQKASDSAFTYNGVSITRPTNEVNDVISGVNITLEQTTEPNKPAIISVSRD
CCEEEEECCCCCCCCCCEEECCEEEECCCHHHHHHHCCCEEEEECCCCCCCCEEEEECCC
NQAIIDSLTEFVKAYNELIPKLDEDTRYDADTKIAGIFNGVGDIRAIRSSLNNVFSYSVH
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHEEEEEE
TDNGVESLMKYGLSLDDKGVMSLDEAKLSSALNSNPKATQDFFYGSDSKDMGGREIHQEG
CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHH
IFSKFNQVIANLIDGGNAKLKIYEDSLDRDAKSLTKDKENAQELLKTRYNIMAERFAAYD
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
SQISKANQKFNSVQMMIDQAAAKKN
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]