| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527406
Identifier: 188527406
GI number: 188527406
Start: 588016
End: 588375
Strand: Reverse
Name: 188527406
Synonym: HPSH_03075
Alternate gene names: NA
Gene position: 588375-588016 (Counterclockwise)
Preceding gene: 188527407
Following gene: 188527405
Centisome position: 36.58
GC content: 39.72
Gene sequence:
>360_bases ATGGTCAATGAAGTTCAAGGGATTGGGATTCCCACATCTCACGCAAGCGTTCAAACAACCCCCATAAAAGAGATCAGTCG CACAAATACTATAAACACTATTGATGAATCTAAAACAACGATAGACCCTGAGCAATACAAACCCAAATTGGAATTATTGA GCGAGCGTCTGAATGAAGAAATGAAGCGCATCGGCACGGATATTAATTTTAGTTATAACGATACGATTAAAGGGTTAGTG GTTTCAGTCAAAGACGCTAATGGGGATAAGGTGATAAGAGAGATACCCTCTAAAGAAGCCGTGGAGCTTATGCAAAGAAT GCGCGATGTGATAGGCATTATCTTTGATAAAAAAGGCTAA
Upstream 100 bases:
>100_bases AATTAAGATTTAACAAATCATTTTTATTGCCGATATTGGCTAAAGAGTTTATGCAAACAAATCATTATACTTGTAGGCAT GAAAAAATTTGGAGGTTTTT
Downstream 100 bases:
>100_bases AAATTAGAGGTAAAACATGGCAATAGGTTCATTAAGCTCATTAGGGCTTGGCAGTAAGGTTTTGAATTACGATGTGATTG ACAAGCTTAAGGACGCCGAT
Product: flagellar protein FlaG
Products: NA
Alternate protein names: Flagellar Protein; Polar Flagellin; Flagellin Protein
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MVNEVQGIGIPTSHASVQTTPIKEISRTNTINTIDESKTTIDPEQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLV VSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKKG
Sequences:
>Translated_119_residues MVNEVQGIGIPTSHASVQTTPIKEISRTNTINTIDESKTTIDPEQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLV VSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKKG >Mature_119_residues MVNEVQGIGIPTSHASVQTTPIKEISRTNTINTIDESKTTIDPEQYKPKLELLSERLNEEMKRIGTDINFSYNDTIKGLV VSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKKG
Specific function: Unknown
COG id: COG1334
COG function: function code N; Uncharacterized flagellar protein FlaG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13375; Mature: 13375
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNEVQGIGIPTSHASVQTTPIKEISRTNTINTIDESKTTIDPEQYKPKLELLSERLNEE CCCCCCCCCCCCCCCCEECCCHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHH MKRIGTDINFSYNDTIKGLVVSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKKG HHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVNEVQGIGIPTSHASVQTTPIKEISRTNTINTIDESKTTIDPEQYKPKLELLSERLNEE CCCCCCCCCCCCCCCCEECCCHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHH MKRIGTDINFSYNDTIKGLVVSVKDANGDKVIREIPSKEAVELMQRMRDVIGIIFDKKG HHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA