Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 188527383

GI number:

Start: 569168

End: 570490

Strand: Direct

Name: Not Available

Synonym: HPSH_02950

Alternate gene names: NA

Gene position: NA

Preceding gene: 188527382

Following gene: 188527384

Centisome position: NA

GC content: NA

Gene sequence:

>1323_bases
GTGCTTGTGAGGTTAGGGGTTGTTGCATGTCTTTTTTGGTTGCATTTTGCTTATGCGACAACCCTTAAAATCATCAACAT
TGTGCCTTTTGGCTCTAGCAGTGTCAAAATCTCGTTCAATCAAGAAATTAAAAAATTCAAAGAAGTTTCGCTCAAAAATT
TCAAGAGTTATTTGGAATTAGAAGCGATCCTAACCATTCCTAAAAAGCATTACCAATTTTCTAAACAATCGTTCATCACG
ATCGCGCAATTTAGCCCTAAATTAGCGCGAGTGGTCATTAGCCATGCCCCTAAGATGACTTATGAAGTTAAAATCCTTAA
AGATAAGCTCTATGTTTCTATCGTGGAGAAAAAGCCCTTAACCAGGCATCAAATGGCGCCAAAACACCAGGTGCTAAAAC
CACCCAAACACCATGCGCTAAAACACCAAGTGTTAAAACCTGCCCATAAATCTATTAAAAAAGAGGCTAAAGAAGTTAAA
GAAAAAACGCCAACTAAGCATGCGCATTCAAAACACACGCATTCTCAATGGAACGAAAGGAGCGCTAAAAAAGAAATTCC
TAAAAAAGAAGCAGAGAATGAGAGTAAAAACCAAGTTTTTATAGCAGAAAAAAATGATGCTTTCATCAAAACCAAGCGCA
AAAAACACAAAAAGATCGTTTTAGACGCCGGGCATGGGGGGAAAGATTGCGGGGCGATTAGCGCGAATTTAGTGTGTGAA
AAAGACATTGTTTTAGAAGTGGTGAAGTTTTTGCATAAAGAGCTTAAAAAAAGAGGCTATAGCGTTTTATTGACAAGGGA
TAAGGACATTTATATTGATTTAGTGGCCCGCACGGAATTAGCCAACAAAAAAAGCGCGGATTTATTCATCTCAGTGCATG
CCAATTCTATCCCTAAACGCTCCACTTCTAACGCTCATGGCATAGAAACTTATTTTTTATCCACCGCAAGGAGCGAAAGG
GCTAGGAAAGTGGCTGAGCAAGAAAATAAAGACGATGTGAATTTGATGGATTATTTTTCTAAAAGCTTGCTTTTAAATTC
ATTAAACACGCAGCGATTGATTGTTTCTAACAAACTGGCGATTGATGTGCAATACGGCATGCTCCAAAGTGTCCGCAAAA
ATTACCCTGATGTGGTGGATGGGGGCGTGAGAGAGGGGCCTTTTTGGGTGTTAGCCGGGGCTTTAATGCCTTCAATTTTA
ATAGAAATTGGTTATAATTCCCATGCGATAGAATCTAAACGCATCCAAAGCAAACCGTATCAAAAAATCTTGGCTAAGGG
CATTGCTGATGGCATTGATAGTTTCTTCAGCAAGAATGATTAG

Upstream 100 bases:

>100_bases
AGAAGAGGGGCTTTATTTTACCGGGGCTAATGGCTATAGAGTGGATAAGATTATCAGCGTGCATGAATTGATTAAAGAGC
TTACAGAGGGTTAATTTGTA

Downstream 100 bases:

>100_bases
GCAATGATTAGGTTATAGATGAATTTTTATCAAAAAATATACACGCATAAAGTCGTTTTTTCTTCATTGTTTTTTTTATT
GTTTTTGTTCAATGTGGAAA

Product: N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>440_residues
MLVRLGVVACLFWLHFAYATTLKIINIVPFGSSSVKISFNQEIKKFKEVSLKNFKSYLELEAILTIPKKHYQFSKQSFIT
IAQFSPKLARVVISHAPKMTYEVKILKDKLYVSIVEKKPLTRHQMAPKHQVLKPPKHHALKHQVLKPAHKSIKKEAKEVK
EKTPTKHAHSKHTHSQWNERSAKKEIPKKEAENESKNQVFIAEKNDAFIKTKRKKHKKIVLDAGHGGKDCGAISANLVCE
KDIVLEVVKFLHKELKKRGYSVLLTRDKDIYIDLVARTELANKKSADLFISVHANSIPKRSTSNAHGIETYFLSTARSER
ARKVAEQENKDDVNLMDYFSKSLLLNSLNTQRLIVSNKLAIDVQYGMLQSVRKNYPDVVDGGVREGPFWVLAGALMPSIL
IEIGYNSHAIESKRIQSKPYQKILAKGIADGIDSFFSKND

Sequences:
NA

Specific function: NA

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA