Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527382

Identifier: 188527382

GI number: 188527382

Start: 568070

End: 569161

Strand: Direct

Name: 188527382

Synonym: HPSH_02945

Alternate gene names: NA

Gene position: 568070-569161 (Clockwise)

Preceding gene: 188527381

Following gene: 188527383

Centisome position: 35.32

GC content: 44.14

Gene sequence:

>1092_bases
ATGGTATCAACACTCAAACCGCTAAAAATCGGTAAGCACACCATAAAATTCCCTATCTTTCAAGGGGGAATGGGTGTGGG
GATTAGCTGGGATGAACTAGCTGGAAATGTTGCCAAAGAAGGGGCTTTAGGAGTGATTTCAGCCGTAGGGACCGGTTATT
ATAAAAACATGCGTTTTGTAGAAAGGATTGTGGCTAAAAAACCCTTTGAAGCCTTGAATTTTTACTCTAAAAAAGCGTTG
AATGAGATTTTTGCAAACGCTAGGAAGATTTGCGGGAACAAGCCTTTGGGGGCGAATATTTTATACGCTATCAATGATTA
CGGTCGTGTTTTAAGGGACGCTTGTGAAGCGGGAGCGAATATCATTATAACAGGGGCTGGCTTACCCACCAACATGCCTG
AATTCGCTAAAGGTTTTAGCGATGTGGCGCTCATCCCTATTATTTCTTCAGCGAAGGCTTTAAAAATCCTTTGTAAAAGG
TGGAGCGATCGGTATAAAAGAATCCCAGACGCATTTATTGTGGAAGGACCTTTGAGTGGGGGGCATCAGGGCTTTAAATA
CGAAGATTGTTTCAAAGAAGAATTCCGATTAGAAAACTTAGTGCCTAAAGTCGTGGAAGCTTCTAAAGAATGGGGGAATA
TCCCTATCATCGCTGCTGGGGGGATTTGGGATAGGAAGGATATAGACACCATGTTAAGTCTTGGAGCGAGTGGGGTGCAG
ATGGCGACTCGTTTTTTAGGCACGAAAGAATGCGACGCTAAAGTGTATGCCGATCTTTTGCCCACGCTCAACAAAGAAGA
TATTTTACTCATTAAATCGCCTGTAGGCTATCCGGCTAGGGCTATTAATACTGGGGTGATCAAGCGCATTGAAGAGGGTA
ACGCGCCCAAAATCGCATGCGTGAGCAATTGTGTAGCGCCTTGTAACAGGGGTGAAGAGGCTAAAAAGGTGGGCTATTGC
ATCGCTGATAGCTTGGGGCGCAGTTATTTAGGAAACAGAGAAGAGGGGCTTTATTTTACCGGGGCTAATGGCTATAGAGT
GGATAAGATTATCAGCGTGCATGAATTGATTAAAGAGCTTACAGAGGGTTAA

Upstream 100 bases:

>100_bases
GTGGTAAAAAATGAGAATTATCGTTTTGTTAAAGGAAATTATGTTATACAGCTTGGTAAGAAAAGATTTATGAAATTAAA
TATTAACTAAGGAAAGAGCT

Downstream 100 bases:

>100_bases
TTTGTAGTGCTTGTGAGGTTAGGGGTTGTTGCATGTCTTTTTTGGTTGCATTTTGCTTATGCGACAACCCTTAAAATCAT
CAACATTGTGCCTTTTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Dioxygenase; 2-Nitropropane Dioxygenase-Like Protein; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase; Enoyl-[Acyl-Carrier-Protein] Reductase; 2-Nitropropane Dioxygenase-Like; Trans-2-Enoyl-ACP Reductase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase-Releated Protein; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFYSKKAL
NEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGANIIITGAGLPTNMPEFAKGFSDVALIPIISSAKALKILCKR
WSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ
MATRFLGTKECDAKVYADLLPTLNKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYC
IADSLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG

Sequences:

>Translated_363_residues
MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFYSKKAL
NEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGANIIITGAGLPTNMPEFAKGFSDVALIPIISSAKALKILCKR
WSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ
MATRFLGTKECDAKVYADLLPTLNKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYC
IADSLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG
>Mature_363_residues
MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFYSKKAL
NEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGANIIITGAGLPTNMPEFAKGFSDVALIPIISSAKALKILCKR
WSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ
MATRFLGTKECDAKVYADLLPTLNKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYC
IADSLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39548; Mature: 39548

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV
CCCCCCCHHCCCEEEEEEEEECCCCCCCCHHHHHCHHHHCCCHHHHHHHHCCHHHHHHHH
ERIVAKKPFEALNFYSKKALNEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGAN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCC
IIITGAGLPTNMPEFAKGFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG
EEEECCCCCCCCHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCHHH
MATRFLGTKECDAKVYADLLPTLNKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC
HHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEHH
VSNCVAPCNRGEEAKKVGYCIADSLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
TEG
HCC
>Mature Secondary Structure
MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV
CCCCCCCHHCCCEEEEEEEEECCCCCCCCHHHHHCHHHHCCCHHHHHHHHCCHHHHHHHH
ERIVAKKPFEALNFYSKKALNEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGAN
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCC
IIITGAGLPTNMPEFAKGFSDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG
EEEECCCCCCCCHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCHHH
MATRFLGTKECDAKVYADLLPTLNKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC
HHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEHH
VSNCVAPCNRGEEAKKVGYCIADSLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH
TEG
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA