Click here to switch to the map view.

The map label for this gene is 188527384

Identifier: 188527384

GI number: 188527384

Start: 570509

End: 571246

Strand: Direct

Name: 188527384

Synonym: HPSH_02955

Alternate gene names: NA

Gene position: 570509-571246 (Clockwise)

Preceding gene: 188527383

Following gene: 188527386

Centisome position: 35.47

GC content: 35.37

Gene sequence:

>738_bases
ATGAATTTTTATCAAAAAATATACACGCATAAAGTCGTTTTTTCTTCATTGTTTTTTTTATTGTTTTTGTTCAATGTGGA
AACTTTGTTGCTTTCGCATTTCAGCGACGATTTTTCGCAATTGTTTTTTTTGTTTGAAAACCATGTTTATGATTTCATTG
TCAAATTAGATTACTTGGGGTTAATAGGCGTTTCTTTAATTTATCTGCTTGTGCTTATTCTAAAGCCTTTCACCCTCACG
CGCCAAAAATGCGCTTGCGTAGGGATATTATGCCTTTCTTTCTACGCTTGGAATTTTCCGGTTAAAGATTCTTTAATGGC
GCTTTATATTTTCTATTTTGCGCTGTTAGCGACTTTATTGTGGCGTTTTTTAGGGGCTAGCATGAAGCAATCTTTCTTGC
CCTCTATGAATATTTGCATCGTGTGGATTTTTGCTTCTTCTTTACAGAGTTTTAAATTTTTAAGCGTGTCTGATTGCGTG
GATTTTTCCCTTTTTATACTCGCTCTTATTTTATTGATACTGGTTTTAATCTACCACAAACGCCTTTTTGGGTTGTATGA
ATACGCTAACATGCTCATTTTGATCGTGGGGCTTAGCGTGGTGGTGCTATGCTCTAGCATGCTCATTCAAACTAAAGAAT
ACTATGGCATGCGATTGGGTTTTTATTTTTTAGGCTTGTTAGGGTGGCTTTTAGAATATGTGCATAACACTTTAAGGCGC
TTGGAGCATCAAATTTAA

Upstream 100 bases:

>100_bases
CATCCAAAGCAAACCGTATCAAAAAATCTTGGCTAAGGGCATTGCTGATGGCATTGATAGTTTCTTCAGCAAGAATGATT
AGGCAATGATTAGGTTATAG

Downstream 100 bases:

>100_bases
GCTCAAGTAGGGATAGCTAAAGCCTTTTGATTGAGTGTCCTTGATTGAGTGTCCTTGATTGAGTGTCTTTTTAGGGCTTA
AAAGCGGGTTTAAAAAATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNFYQKIYTHKVVFSSLFFLLFLFNVETLLLSHFSDDFSQLFFLFENHVYDFIVKLDYLGLIGVSLIYLLVLILKPFTLT
RQKCACVGILCLSFYAWNFPVKDSLMALYIFYFALLATLLWRFLGASMKQSFLPSMNICIVWIFASSLQSFKFLSVSDCV
DFSLFILALILLILVLIYHKRLFGLYEYANMLILIVGLSVVVLCSSMLIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR
LEHQI

Sequences:

>Translated_245_residues
MNFYQKIYTHKVVFSSLFFLLFLFNVETLLLSHFSDDFSQLFFLFENHVYDFIVKLDYLGLIGVSLIYLLVLILKPFTLT
RQKCACVGILCLSFYAWNFPVKDSLMALYIFYFALLATLLWRFLGASMKQSFLPSMNICIVWIFASSLQSFKFLSVSDCV
DFSLFILALILLILVLIYHKRLFGLYEYANMLILIVGLSVVVLCSSMLIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR
LEHQI
>Mature_245_residues
MNFYQKIYTHKVVFSSLFFLLFLFNVETLLLSHFSDDFSQLFFLFENHVYDFIVKLDYLGLIGVSLIYLLVLILKPFTLT
RQKCACVGILCLSFYAWNFPVKDSLMALYIFYFALLATLLWRFLGASMKQSFLPSMNICIVWIFASSLQSFKFLSVSDCV
DFSLFILALILLILVLIYHKRLFGLYEYANMLILIVGLSVVVLCSSMLIQTKEYYGMRLGFYFLGLLGWLLEYVHNTLRR
LEHQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28696; Mature: 28696

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCC
>Mature Secondary Structure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HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA