Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527353

Identifier: 188527353

GI number: 188527353

Start: 536665

End: 537411

Strand: Direct

Name: 188527353

Synonym: HPSH_02800

Alternate gene names: NA

Gene position: 536665-537411 (Clockwise)

Preceding gene: 188527352

Following gene: 188527354

Centisome position: 33.36

GC content: 40.96

Gene sequence:

>747_bases
ATGGTTTTGGTTATTATTTGGGGGTTAGGCTGTAATTTTTTAAACGCTAACAGCGTTCAATTAGAAGAAACGCTCAGGCG
AAGTCCTAAAAATCTTATTTGGCAACACTTTAAAAAGAGGTTTAAAAAGAGCAACACGATCCCTTATGCCCCAAATAGCC
GTTGGAAATATTTAGGCACGAGTGTTGGGATTTTAGGCGTGTCTTTGGTGATAGGGATTGTGGGGTTGTATCTCATGCCA
GAGAGCGTAACGAATTGGGATAGAGAAAAGTTTGGGATCAAAAGTTGGTTTGAAAATGTCCGCATGGGGCCAAAACTGGA
CAATGATAGTTTTATTTTCAATGAAATTTTGCACCCTTATTTTGGGGCTATGTATTATATGCAACCGCGCATGGCTGGGT
TTGGTTGGATGGCATCAGCGTTTTTTTCTTTTATCACTTCCACGCTTTTTTGGGAATATGGCTTGGAAGCGTTTGTGGAA
GTGCCCAGCTGGCAGGATCTAGTGATCACGCCTTTATTAGGCTCCATTTTAGGAGAAGGGTTTTATCAGCTCACGCGCTA
TATCCAACGCAACGAAGGCAAGCTTTTTGGCTCTTTATTTTTAGGGCGTTTGGTTATCGCTCTTATGGATCCTATCGGTT
TTATCATTAGGGATTTAGGGCTTGGGGAAGCTTTAGGGATTCATAATAAACATGAAATCCGTTCTAGCTTAGGCCCCAAT
GGTTTGAATTTGACTTACAAATTTTAA

Upstream 100 bases:

>100_bases
CAACCTGATGAGAGTAATAATAGAGTTTATGCTGATTTCATTAAAAACATTCCTAAAAATATTATTGAAAATATTCTTAA
AAACATTCCAAAAGATTTGG

Downstream 100 bases:

>100_bases
AGGAGTAACCCGTATCAAGCGATTTTAAAAACATTTTTATCGGCACAAATTATAAAGAGTTTTGATAGAATACCTTTTTT
TAAAAGATGCGTTTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MVLVIIWGLGCNFLNANSVQLEETLRRSPKNLIWQHFKKRFKKSNTIPYAPNSRWKYLGTSVGILGVSLVIGIVGLYLMP
ESVTNWDREKFGIKSWFENVRMGPKLDNDSFIFNEILHPYFGAMYYMQPRMAGFGWMASAFFSFITSTLFWEYGLEAFVE
VPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIRDLGLGEALGIHNKHEIRSSLGPN
GLNLTYKF

Sequences:

>Translated_248_residues
MVLVIIWGLGCNFLNANSVQLEETLRRSPKNLIWQHFKKRFKKSNTIPYAPNSRWKYLGTSVGILGVSLVIGIVGLYLMP
ESVTNWDREKFGIKSWFENVRMGPKLDNDSFIFNEILHPYFGAMYYMQPRMAGFGWMASAFFSFITSTLFWEYGLEAFVE
VPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIRDLGLGEALGIHNKHEIRSSLGPN
GLNLTYKF
>Mature_248_residues
MVLVIIWGLGCNFLNANSVQLEETLRRSPKNLIWQHFKKRFKKSNTIPYAPNSRWKYLGTSVGILGVSLVIGIVGLYLMP
ESVTNWDREKFGIKSWFENVRMGPKLDNDSFIFNEILHPYFGAMYYMQPRMAGFGWMASAFFSFITSTLFWEYGLEAFVE
VPSWQDLVITPLLGSILGEGFYQLTRYIQRNEGKLFGSLFLGRLVIALMDPIGFIIRDLGLGEALGIHNKHEIRSSLGPN
GLNLTYKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28370; Mature: 28370

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCEEEEEC
>Mature Secondary Structure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CCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA