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The map label for this gene is hspR [H]

Identifier: 188527231

GI number: 188527231

Start: 415561

End: 415932

Strand: Reverse

Name: hspR [H]

Synonym: HPSH_02190

Alternate gene names: 188527231

Gene position: 415932-415561 (Counterclockwise)

Preceding gene: 188527232

Following gene: 188527230

Centisome position: 25.86

GC content: 38.17

Gene sequence:

>372_bases
GTGTGCGATTATGATGAACCGCTTTATTTGATAAGCGTTGTGGCTAAAATCTTAGGCGTGCACCCTCAAACCTTGCGCCA
ATACGAAAAAGAGGGTTTGATAGAGCCTAGCAGGACTGATGGGAAAATGCGCCTATACTCCCAACGAGATATGGATAAAA
TCAAAACGATTTTACGCCTTACAAGGGATATGGGGGTTAATCTAGCGGGTGTGGATATTATTTTGCGTTTAAAAGAAAAG
CTTGATGAGTTAGACAGCCTGAATAAAGAATTGCAAGACGCTCTGCACAAACACTCTAAAAACAACAAAACCCCAACGAA
AAATTTAAACACCCCTACTAATTTTTATGAATTGATTTTATTTAAAAAATGA

Upstream 100 bases:

>100_bases
GGGGGATTTGTATTTGCAAGCTCGTTTGATTTTGCCTAAAACTGAAACGCTTTCTAGCGAGTTAAAAGCGTTATTAGAAA
AAGAATTGTAAGGAGGAATC

Downstream 100 bases:

>100_bases
GCCTGACTTCGCTTTTAAACCCAAAAAGCCTAGAAGATTTTTTAGGCCAAGAGCATCTAATAGGGAAAGACGCCCCCTTA
TTTAAAGCCTTACAATCCAA

Product: putative heat shock protein (hspR)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSQRDMDKIKTILRLTRDMGVNLAGVDIILRLKEK
LDELDSLNKELQDALHKHSKNNKTPTKNLNTPTNFYELILFKK

Sequences:

>Translated_123_residues
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSQRDMDKIKTILRLTRDMGVNLAGVDIILRLKEK
LDELDSLNKELQDALHKHSKNNKTPTKNLNTPTNFYELILFKK
>Mature_123_residues
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSQRDMDKIKTILRLTRDMGVNLAGVDIILRLKEK
LDELDSLNKELQDALHKHSKNNKTPTKNLNTPTNFYELILFKK

Specific function: Binds to three inverted repeats (IR1-IR3) in the promoter region of the dnaK operon [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 14330; Mature: 14330

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSQRDMDKIKTILRL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHH
TRDMGVNLAGVDIILRLKEKLDELDSLNKELQDALHKHSKNNKTPTKNLNTPTNFYELIL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHE
FKK
ECC
>Mature Secondary Structure
MCDYDEPLYLISVVAKILGVHPQTLRQYEKEGLIEPSRTDGKMRLYSQRDMDKIKTILRL
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHH
TRDMGVNLAGVDIILRLKEKLDELDSLNKELQDALHKHSKNNKTPTKNLNTPTNFYELIL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHE
FKK
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8801421; 12000953 [H]